| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yaiP [C]
Identifier: 188586064
GI number: 188586064
Start: 1504435
End: 1505076
Strand: Direct
Name: yaiP [C]
Synonym: Nther_1438
Alternate gene names: 188586064
Gene position: 1504435-1505076 (Clockwise)
Preceding gene: 188586063
Following gene: 188586065
Centisome position: 47.53
GC content: 38.01
Gene sequence:
>642_bases GTGAATGAAACAGTAGCGATAATACCGGCATATAACGAAGAGAGTACTATCGGTAATGTATTATCAGTGCTAAATAACAG TAGAGTGATTGATCAAACCGTTGTTGTTAGTGATGGTTCTACAGATAACACAGTTCAAGTCTCTAGAGAGTTTGGGGCTA ATGTCATAGAATTAGAAGAAAATGTTGGCAAGGGTGGAGCCATGAAGGCGGGCCTTGACAATATTACTGCCGATATTATC CTCTTCTTAGATGCCGATCTGATTGGTTTGACCTCGATACATATTGAAGCACTGCTACTCCCTGTTATTAATAACGAAGC TGATATGACTGTAGGTATCTTCGAAAAAGGTCGAATTGCCACTGATTTTGCCCAAAAGGTGGCACCTTATCTATCTGGAC AAAGAGCTGTTGCCAAGAAAGTTTTGACAGACATTTCAGATATAAATATGTCTAGATTTGGAGTAGAGGTGGCCTTGAAT CGTCATATTGAAGAAAATAACATTAGAGTTAAAGAAGTGATTTTGCAAGATGTCAGTCATGTTATGAAAGAGGAGAAATT TGGTGTTCTGCGAGGTTTTGCAGCCAGGATGAAAATGTACTGGGAAATTGTTAAGTATTTTGCCAAAAAAGAAGTTAAAT AA
Upstream 100 bases:
>100_bases AAGTCCTGTCTCGAGCCATCGATGAATATATTGATGAGATTCACAGCAAGTAATTATAGGGAAAACTGATCAAATAAATA TGATTTCGGAGGTTTTGGCC
Downstream 100 bases:
>100_bases ACTCAGGGGGAAGTTGCTATGGTTGCTCAGGAACTACGGGATAATACCCTAAAGGATTTTGTAAACAAATGTTTAGTAGA TCAAAATAGAAATAGATGGA
Product: glycosyl transferase family 2
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Dolichol-Phosphate Mannosyltransferase; Family 2 Glycosyl Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Dolichyl-Phosphate Mannose Synthase; Dolichol-Phosphate Mannose Synthase; Glycosyltransferase Involved In Cell Wall Biogenesis; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase GT2 Family; Cell Wall Biosynthesis Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Family 2 Glycosyltransferase; LmbE-Like Protein; Glucosyl-3-Phosphoglycerate Synthase; Dolichyl-Phosphate Mannose Synthase-Like Protein; Dolichyl-Phosphate Mannoosyltransferase Related Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNETVAIIPAYNEESTIGNVLSVLNNSRVIDQTVVVSDGSTDNTVQVSREFGANVIELEENVGKGGAMKAGLDNITADII LFLDADLIGLTSIHIEALLLPVINNEADMTVGIFEKGRIATDFAQKVAPYLSGQRAVAKKVLTDISDINMSRFGVEVALN RHIEENNIRVKEVILQDVSHVMKEEKFGVLRGFAARMKMYWEIVKYFAKKEVK
Sequences:
>Translated_213_residues MNETVAIIPAYNEESTIGNVLSVLNNSRVIDQTVVVSDGSTDNTVQVSREFGANVIELEENVGKGGAMKAGLDNITADII LFLDADLIGLTSIHIEALLLPVINNEADMTVGIFEKGRIATDFAQKVAPYLSGQRAVAKKVLTDISDINMSRFGVEVALN RHIEENNIRVKEVILQDVSHVMKEEKFGVLRGFAARMKMYWEIVKYFAKKEVK >Mature_213_residues MNETVAIIPAYNEESTIGNVLSVLNNSRVIDQTVVVSDGSTDNTVQVSREFGANVIELEENVGKGGAMKAGLDNITADII LFLDADLIGLTSIHIEALLLPVINNEADMTVGIFEKGRIATDFAQKVAPYLSGQRAVAKKVLTDISDINMSRFGVEVALN RHIEENNIRVKEVILQDVSHVMKEEKFGVLRGFAARMKMYWEIVKYFAKKEVK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23512; Mature: 23512
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETVAIIPAYNEESTIGNVLSVLNNSRVIDQTVVVSDGSTDNTVQVSREFGANVIELEE CCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEHHHCCCEEEECC NVGKGGAMKAGLDNITADIILFLDADLIGLTSIHIEALLLPVINNEADMTVGIFEKGRIA CCCCCCCCCCCHHHHHHHEEEEECCCHHHHHHHHHHHHEEHHCCCCCCEEEEEECCCCCH TDFAQKVAPYLSGQRAVAKKVLTDISDINMSRFGVEVALNRHIEENNIRVKEVILQDVSH HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH VMKEEKFGVLRGFAARMKMYWEIVKYFAKKEVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNETVAIIPAYNEESTIGNVLSVLNNSRVIDQTVVVSDGSTDNTVQVSREFGANVIELEE CCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEHHHCCCEEEECC NVGKGGAMKAGLDNITADIILFLDADLIGLTSIHIEALLLPVINNEADMTVGIFEKGRIA CCCCCCCCCCCHHHHHHHEEEEECCCHHHHHHHHHHHHEEHHCCCCCCEEEEEECCCCCH TDFAQKVAPYLSGQRAVAKKVLTDISDINMSRFGVEVALNRHIEENNIRVKEVILQDVSH HHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH VMKEEKFGVLRGFAARMKMYWEIVKYFAKKEVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA