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The map label for this gene is fliP [H]

Identifier: 188586035

GI number: 188586035

Start: 1478657

End: 1479424

Strand: Direct

Name: fliP [H]

Synonym: Nther_1409

Alternate gene names: 188586035

Gene position: 1478657-1479424 (Clockwise)

Preceding gene: 188586034

Following gene: 188586036

Centisome position: 46.71

GC content: 38.28

Gene sequence:

>768_bases
ATGGTGAAAGATAGAAAAACACTTGTGCCGGCTATTATTATAATAGTACTGATATTATTAATTCCTTCCCAAACAGAAGC
AGCTCAACCTTTTCCAATTCCTAATTTGGAATTGGAGGTAGGAGAAGGGGAAGAACCAGAGGACTTGGCATTAACTTTAC
AAATAATAATTCTGTTGACAATTTTAAGTCTAGCACCGGCATTACTCATTCTAACTACCTCTTTCACCAGGGTAGTAATT
GTACTGTCTTTTATCAGGAATGCCTTGGCTACTCAACAGATGCCTCCCAATCAAGTTTTAATTGGATTGGCTCTTTTTCT
AACTTTTTTCATAATGAGTCCTGTATGGGGCGATGTGTATCAGGAAGCCTGGGAGCCCTATCGCGAAGGTGATATTACTC
AAGAAGAAGCCATTGAAAATGGTCTTGAACCTGTTAGGGAATTTATGTATCAACAGACGAGGGAAGATGATCTGGCTTTG
TTTGTAGAATACTCGGATATTGAAAACCCTGCAACAATCGAAGATGTACCGACCCATGTTATCATCCCGGCCTTTGTAAT
CAGTGAATTAAAAACCGCTTTTCAAATTGGTTTTATGATATTTGTACCTTTTTTAATTATAGATATGATTGTGGCAAGTA
CATTAATGTCCATGGGGATGCTCATGCTCCCACCCGTGATGATATCACTTCCTTTTAAGGTACTACTTTTTGTACTTGTT
GATGGTTGGTTCTTAATTACCAGGTCCCTACTTATAAGCTTTGGATGA

Upstream 100 bases:

>100_bases
CAAGGAAAAACCTTTAATGAAGACGATGAAAGTTTTGAACAACAATTACAAGAAGAACTGAACAAGATGCGACGCTCTAA
AGATGAGGGAGGACACGATG

Downstream 100 bases:

>100_bases
CAATACGAGGTGAATAGCTTTGACAGAAGAATTTGTGTTACATCTAGGCCGTGAAGCTCTAATAACTGTTTTACTCGCTG
CCGCTCCTATGCTGGCATCA

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MVKDRKTLVPAIIIIVLILLIPSQTEAAQPFPIPNLELEVGEGEEPEDLALTLQIIILLTILSLAPALLILTTSFTRVVI
VLSFIRNALATQQMPPNQVLIGLALFLTFFIMSPVWGDVYQEAWEPYREGDITQEEAIENGLEPVREFMYQQTREDDLAL
FVEYSDIENPATIEDVPTHVIIPAFVISELKTAFQIGFMIFVPFLIIDMIVASTLMSMGMLMLPPVMISLPFKVLLFVLV
DGWFLITRSLLISFG

Sequences:

>Translated_255_residues
MVKDRKTLVPAIIIIVLILLIPSQTEAAQPFPIPNLELEVGEGEEPEDLALTLQIIILLTILSLAPALLILTTSFTRVVI
VLSFIRNALATQQMPPNQVLIGLALFLTFFIMSPVWGDVYQEAWEPYREGDITQEEAIENGLEPVREFMYQQTREDDLAL
FVEYSDIENPATIEDVPTHVIIPAFVISELKTAFQIGFMIFVPFLIIDMIVASTLMSMGMLMLPPVMISLPFKVLLFVLV
DGWFLITRSLLISFG
>Mature_255_residues
MVKDRKTLVPAIIIIVLILLIPSQTEAAQPFPIPNLELEVGEGEEPEDLALTLQIIILLTILSLAPALLILTTSFTRVVI
VLSFIRNALATQQMPPNQVLIGLALFLTFFIMSPVWGDVYQEAWEPYREGDITQEEAIENGLEPVREFMYQQTREDDLAL
FVEYSDIENPATIEDVPTHVIIPAFVISELKTAFQIGFMIFVPFLIIDMIVASTLMSMGMLMLPPVMISLPFKVLLFVLV
DGWFLITRSLLISFG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=208, Percent_Identity=54.3269230769231, Blast_Score=234, Evalue=4e-63,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28623; Mature: 28623

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKDRKTLVPAIIIIVLILLIPSQTEAAQPFPIPNLELEVGEGEEPEDLALTLQIIILLT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
ILSLAPALLILTTSFTRVVIVLSFIRNALATQQMPPNQVLIGLALFLTFFIMSPVWGDVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
QEAWEPYREGDITQEEAIENGLEPVREFMYQQTREDDLALFVEYSDIENPATIEDVPTHV
HHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCHH
IIPAFVISELKTAFQIGFMIFVPFLIIDMIVASTLMSMGMLMLPPVMISLPFKVLLFVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGWFLITRSLLISFG
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKDRKTLVPAIIIIVLILLIPSQTEAAQPFPIPNLELEVGEGEEPEDLALTLQIIILLT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHH
ILSLAPALLILTTSFTRVVIVLSFIRNALATQQMPPNQVLIGLALFLTFFIMSPVWGDVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
QEAWEPYREGDITQEEAIENGLEPVREFMYQQTREDDLALFVEYSDIENPATIEDVPTHV
HHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCHH
IIPAFVISELKTAFQIGFMIFVPFLIIDMIVASTLMSMGMLMLPPVMISLPFKVLLFVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGWFLITRSLLISFG
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]