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The map label for this gene is rsgA [H]

Identifier: 188585967

GI number: 188585967

Start: 1415721

End: 1416587

Strand: Direct

Name: rsgA [H]

Synonym: Nther_1341

Alternate gene names: 188585967

Gene position: 1415721-1416587 (Clockwise)

Preceding gene: 188585966

Following gene: 188585968

Centisome position: 44.72

GC content: 36.79

Gene sequence:

>867_bases
ATGCAGGGTAGAGTAGTCAAAATTATAAATGATTTCTATTATGTACAAGGCAATGAAAAGAACGCAACAATAGAATGTAA
ATTAAAAGGCAATTTAATTAAAGATAATAACTTTCCCTTAGTAGGAGACGTAGTTTTAGTGGAACTTACAGGGGAAGGGC
AGGGTATGATATCAGATTTATCATCCCGAGAGAACCGGCTTGTAAAACCTGCAGTTGCCAATGTGGATCAGGTGATTGTA
GTCACATCTGTCAAAAACCCTAAACCGAATCTCCAATTAGTTGACCGTCTATTGGTTTGGGCTTATTTTGAAGGATTACA
GGGAATGGTCTGTATTAACAAAAGAGAACTAGACTATCAAAAAGCACAGGAATTGGCTGAAATATATAAAACTTCAGAGA
TAAATACAACCTTAATCAGTGTCAAGGAAAACGATCTGGATCATCTCCCAAAATTCTTTGAAAATAAAACTTCCGTTCTA
GCTGGTCAATCTGGCGTAGGTAAATCCAGTATTTTAAACACCTTGAATCCGGACTTAAACTTGGAGGTAAATCCCGTAAG
CAGAAAAGCTGGTACGGGCAAACATACCACCCGTCATTGTCAACTTTTAAAAGCCGGTGGAGGATTTTTAGTTGATACAC
CAGGATTTAACAAAAAAAAGTTGCCAGAAATAGTGCCAGAACAGCTAGAACTTGCATTTCCAGAAATAAAAAAGCATTCT
TCAGATTGCAAATTTAATGACTGCTCTCATAGAAAGGAACCTGATTGTCAAGTTAAGAAATTGGTCGGCACTGATATACC
TACTACGAGATACGAACACTTTGTCAAATTTTTTGAAGAATTGGTAGACATGGAAAGGAGTTTTTGA

Upstream 100 bases:

>100_bases
AGAACAAGGAATAGTTGAAATATCTACCCAAGATGAACAAGGTGAATTCACACAGATTTACGATATCATAATTTTCCCCG
AGTAAGGTGGGTGATAATAA

Downstream 100 bases:

>100_bases
TGATGACATTAGTGGCACCATCAATATTATCAGCTGATTTATTGAAGTTAGAAGAGCAGATCAAGGCTGTTGAAGCTGCT
GGGGCAGATATGATTCACGT

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MQGRVVKIINDFYYVQGNEKNATIECKLKGNLIKDNNFPLVGDVVLVELTGEGQGMISDLSSRENRLVKPAVANVDQVIV
VTSVKNPKPNLQLVDRLLVWAYFEGLQGMVCINKRELDYQKAQELAEIYKTSEINTTLISVKENDLDHLPKFFENKTSVL
AGQSGVGKSSILNTLNPDLNLEVNPVSRKAGTGKHTTRHCQLLKAGGGFLVDTPGFNKKKLPEIVPEQLELAFPEIKKHS
SDCKFNDCSHRKEPDCQVKKLVGTDIPTTRYEHFVKFFEELVDMERSF

Sequences:

>Translated_288_residues
MQGRVVKIINDFYYVQGNEKNATIECKLKGNLIKDNNFPLVGDVVLVELTGEGQGMISDLSSRENRLVKPAVANVDQVIV
VTSVKNPKPNLQLVDRLLVWAYFEGLQGMVCINKRELDYQKAQELAEIYKTSEINTTLISVKENDLDHLPKFFENKTSVL
AGQSGVGKSSILNTLNPDLNLEVNPVSRKAGTGKHTTRHCQLLKAGGGFLVDTPGFNKKKLPEIVPEQLELAFPEIKKHS
SDCKFNDCSHRKEPDCQVKKLVGTDIPTTRYEHFVKFFEELVDMERSF
>Mature_288_residues
MQGRVVKIINDFYYVQGNEKNATIECKLKGNLIKDNNFPLVGDVVLVELTGEGQGMISDLSSRENRLVKPAVANVDQVIV
VTSVKNPKPNLQLVDRLLVWAYFEGLQGMVCINKRELDYQKAQELAEIYKTSEINTTLISVKENDLDHLPKFFENKTSVL
AGQSGVGKSSILNTLNPDLNLEVNPVSRKAGTGKHTTRHCQLLKAGGGFLVDTPGFNKKKLPEIVPEQLELAFPEIKKHS
SDCKFNDCSHRKEPDCQVKKLVGTDIPTTRYEHFVKFFEELVDMERSF

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. Dispensible for viability, but important for overall fitness [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=226, Percent_Identity=32.7433628318584, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 32351; Mature: 32351

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGRVVKIINDFYYVQGNEKNATIECKLKGNLIKDNNFPLVGDVVLVELTGEGQGMISDL
CCCCEEEEEEEEEEEECCCCCCEEEEEEECCEEECCCCCEEEEEEEEEECCCCCCHHHHH
SSRENRLVKPAVANVDQVIVVTSVKNPKPNLQLVDRLLVWAYFEGLQGMVCINKRELDYQ
HHHCCCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
KAQELAEIYKTSEINTTLISVKENDLDHLPKFFENKTSVLAGQSGVGKSSILNTLNPDLN
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCHHEEECCCCCCHHHHHHHCCCCCE
LEVNPVSRKAGTGKHTTRHCQLLKAGGGFLVDTPGFNKKKLPEIVPEQLELAFPEIKKHS
EEECCCCCCCCCCCCCHHHHEEEECCCCEEEECCCCCHHCCHHHCHHHHHHHCHHHHCCC
SDCKFNDCSHRKEPDCQVKKLVGTDIPTTRYEHFVKFFEELVDMERSF
CCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGRVVKIINDFYYVQGNEKNATIECKLKGNLIKDNNFPLVGDVVLVELTGEGQGMISDL
CCCCEEEEEEEEEEEECCCCCCEEEEEEECCEEECCCCCEEEEEEEEEECCCCCCHHHHH
SSRENRLVKPAVANVDQVIVVTSVKNPKPNLQLVDRLLVWAYFEGLQGMVCINKRELDYQ
HHHCCCCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
KAQELAEIYKTSEINTTLISVKENDLDHLPKFFENKTSVLAGQSGVGKSSILNTLNPDLN
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCHHEEECCCCCCHHHHHHHCCCCCE
LEVNPVSRKAGTGKHTTRHCQLLKAGGGFLVDTPGFNKKKLPEIVPEQLELAFPEIKKHS
EEECCCCCCCCCCCCCHHHHEEEECCCCEEEECCCCCHHCCHHHCHHHHHHHCHHHHCCC
SDCKFNDCSHRKEPDCQVKKLVGTDIPTTRYEHFVKFFEELVDMERSF
CCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377; 9743119 [H]