Click here to switch to the map view.

The map label for this gene is sepF

Identifier: 188585942

GI number: 188585942

Start: 1388972

End: 1389475

Strand: Direct

Name: sepF

Synonym: Nther_1316

Alternate gene names: 188585942

Gene position: 1388972-1389475 (Clockwise)

Preceding gene: 188585941

Following gene: 188585943

Centisome position: 43.88

GC content: 34.92

Gene sequence:

>504_bases
ATGAATTTTTTTGAAAAGATACTAGTATTTTTAGGGCTAGCCGAAGAAGCAGAGGAGGAAATTATAGAAGATGAAGAAGA
TGTAGCACCAGTTAACAACTCTACCTTCCAAGAAAAAAAACATAAAAAACGAAGTGCTGTTCAAAGAAAACAGAAAAATA
GTGATCAGGAAGGGGATTCGGTAGTGCCACTACACAGTACAAAAAATACACAAGGTATAAAAATTCACTTAATTGCACCC
AGTAAATACGAAGAAGCTCAAGAAATTGGGAAATACCTAAAAAGTGGTTTTCCTGTGGTCGTAAACTTAGAACAATTAGA
AATGGAGACGGCCAAACAAATGATTGATTTTGTTAGTGGGACAGTTTTTGCCCTTGATGGCAATTTACACAAAATTGGGC
AGCAAATATTCTTATTTTCGCCACCTAATGTAGGAATAGATGGTGCCATTGATACCACTGGAGATGAATTTTTTGATCAA
AAAACATACGAAGAATATGAATAG

Upstream 100 bases:

>100_bases
GGGGATGTCCCATGACTACCATATAGCCATTGAAGAAGGAGCAAACATGGTTAGAGTTGGTAGGTCACTGTTTACACAAA
GAGAGGAGGGGTAAGATAAT

Downstream 100 bases:

>100_bases
GAGATGTAATAAATGCCTGTGGTGAGTTTGTTTAATTGGATTTTTCAAATTGTATATATAATGCTGATTATTAGAGTGAT
CTTTTCCTTTTTGCGTCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNFFEKILVFLGLAEEAEEEIIEDEEDVAPVNNSTFQEKKHKKRSAVQRKQKNSDQEGDSVVPLHSTKNTQGIKIHLIAP
SKYEEAQEIGKYLKSGFPVVVNLEQLEMETAKQMIDFVSGTVFALDGNLHKIGQQIFLFSPPNVGIDGAIDTTGDEFFDQ
KTYEEYE

Sequences:

>Translated_167_residues
MNFFEKILVFLGLAEEAEEEIIEDEEDVAPVNNSTFQEKKHKKRSAVQRKQKNSDQEGDSVVPLHSTKNTQGIKIHLIAP
SKYEEAQEIGKYLKSGFPVVVNLEQLEMETAKQMIDFVSGTVFALDGNLHKIGQQIFLFSPPNVGIDGAIDTTGDEFFDQ
KTYEEYE
>Mature_167_residues
MNFFEKILVFLGLAEEAEEEIIEDEEDVAPVNNSTFQEKKHKKRSAVQRKQKNSDQEGDSVVPLHSTKNTQGIKIHLIAP
SKYEEAQEIGKYLKSGFPVVVNLEQLEMETAKQMIDFVSGTVFALDGNLHKIGQQIFLFSPPNVGIDGAIDTTGDEFFDQ
KTYEEYE

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_NATTJ (B2A2I4)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001917487.1
- GeneID:   6315554
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_1316
- HOGENOM:   HBG700081
- OMA:   PAVEESM
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 18886; Mature: 18886

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFEKILVFLGLAEEAEEEIIEDEEDVAPVNNSTFQEKKHKKRSAVQRKQKNSDQEGDS
CCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
VVPLHSTKNTQGIKIHLIAPSKYEEAQEIGKYLKSGFPVVVNLEQLEMETAKQMIDFVSG
EEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCC
TVFALDGNLHKIGQQIFLFSPPNVGIDGAIDTTGDEFFDQKTYEEYE
EEEEECCCHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNFFEKILVFLGLAEEAEEEIIEDEEDVAPVNNSTFQEKKHKKRSAVQRKQKNSDQEGDS
CCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
VVPLHSTKNTQGIKIHLIAPSKYEEAQEIGKYLKSGFPVVVNLEQLEMETAKQMIDFVSG
EEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCC
TVFALDGNLHKIGQQIFLFSPPNVGIDGAIDTTGDEFFDQKTYEEYE
EEEEECCCHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA