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The map label for this gene is csoR [H]

Identifier: 188585919

GI number: 188585919

Start: 1366126

End: 1366386

Strand: Direct

Name: csoR [H]

Synonym: Nther_1293

Alternate gene names: 188585919

Gene position: 1366126-1366386 (Clockwise)

Preceding gene: 188585918

Following gene: 188585920

Centisome position: 43.16

GC content: 33.33

Gene sequence:

>261_bases
ATGAGTGAAAAAGAGGCCTTGATAAATCGATTACGTAGGATAGAAGGTCAAATAAAAGGTCTTCAAAAGATGGTAGAAGA
AGAAAAATATTGTTCAGATATTTTGATGCAAGTTTCAGCAGTTAGATCAGCTGTTAATAATGTAGGAAAATTGGTTTTGG
AAGAACATTTACGGAAGTGTATCGATTTACCTCAGGACGAAGAAGAACGGGAACGAGCAATTAAAGAATTAACTGAATTA
ATTGCCAAATACAGCAATTAA

Upstream 100 bases:

>100_bases
TAATCAGGTTCAAAACATGCGTGTAGTGCACGGCACAGCGGGGGCGCTTTCACTTTTATCTTGATAGTCGATATAGTATT
CGTTTAGGGGGTAATTTGAA

Downstream 100 bases:

>100_bases
TTTAACGTATGTACTTAAAGGGTTTAAGTGTATCAAAAAAATTCAGAAAATTAACATTACGTTTCTCCCCCTAAACTGAT
AAAATTATTTGAAAGCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MSEKEALINRLRRIEGQIKGLQKMVEEEKYCSDILMQVSAVRSAVNNVGKLVLEEHLRKCIDLPQDEEERERAIKELTEL
IAKYSN

Sequences:

>Translated_86_residues
MSEKEALINRLRRIEGQIKGLQKMVEEEKYCSDILMQVSAVRSAVNNVGKLVLEEHLRKCIDLPQDEEERERAIKELTEL
IAKYSN
>Mature_85_residues
SEKEALINRLRRIEGQIKGLQKMVEEEKYCSDILMQVSAVRSAVNNVGKLVLEEHLRKCIDLPQDEEERERAIKELTELI
AKYSN

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10001; Mature: 9870

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKEALINRLRRIEGQIKGLQKMVEEEKYCSDILMQVSAVRSAVNNVGKLVLEEHLRKC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDLPQDEEERERAIKELTELIAKYSN
CCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEKEALINRLRRIEGQIKGLQKMVEEEKYCSDILMQVSAVRSAVNNVGKLVLEEHLRKC
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDLPQDEEERERAIKELTELIAKYSN
CCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]