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The map label for this gene is yjbQ [C]

Identifier: 188585848

GI number: 188585848

Start: 1297365

End: 1297751

Strand: Reverse

Name: yjbQ [C]

Synonym: Nther_1222

Alternate gene names: 188585848

Gene position: 1297751-1297365 (Counterclockwise)

Preceding gene: 188585849

Following gene: 188585845

Centisome position: 41.0

GC content: 35.4

Gene sequence:

>387_bases
ATGGAAATAACAGTAACAACTTCCAAGAAAATAGAGTTTATTAATATTACTGAGGAGGTTAAAAAAGCACTGTCTCAAAT
GGAACTTCCCCAGGGTAATAACAAAGTTCATTTATTTATTCCACATACAACAGCTGCTATTACAGTTAATGAGACTGCAG
ATCCAGATGTCTGCTTCGATCTAGAAAACGCCTGTCAAAAAATAATACCAGACATTTCTTACCAACATCTTGAAGGTAAT
AGTCCAGCTCATTTTTTATCTTCTCTAGTAGGGCCTGATATCATGGTACCTATTAGGAAAAACACATTAGATTTAGGCAG
GTGGCAGGGTATAATTTTTTGCGAATTTGATGGTCCCCGCAGAAGGAAAGTAAAAATCCTATATTAA

Upstream 100 bases:

>100_bases
AAACTTAAAGAAATAGTAAACCTATTTTCCAAGCCCGTAGAAATCTTTAATTAATACATTGCAACAATAATACATTGTGA
CTTGGATAGGAGGTGATGTA

Downstream 100 bases:

>100_bases
CTTCTTTAACATCTTACATTTTTAAGTATAAATAACCCACGACTATAGCCGTGGGTTATTATTATTTCTCAATTATTCAG
TTCCATCAACATTATAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MEITVTTSKKIEFINITEEVKKALSQMELPQGNNKVHLFIPHTTAAITVNETADPDVCFDLENACQKIIPDISYQHLEGN
SPAHFLSSLVGPDIMVPIRKNTLDLGRWQGIIFCEFDGPRRRKVKILY

Sequences:

>Translated_128_residues
MEITVTTSKKIEFINITEEVKKALSQMELPQGNNKVHLFIPHTTAAITVNETADPDVCFDLENACQKIIPDISYQHLEGN
SPAHFLSSLVGPDIMVPIRKNTLDLGRWQGIIFCEFDGPRRRKVKILY
>Mature_128_residues
MEITVTTSKKIEFINITEEVKKALSQMELPQGNNKVHLFIPHTTAAITVNETADPDVCFDLENACQKIIPDISYQHLEGN
SPAHFLSSLVGPDIMVPIRKNTLDLGRWQGIIFCEFDGPRRRKVKILY

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=128, Percent_Identity=34.375, Blast_Score=71, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221476594, Length=95, Percent_Identity=40, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221476589, Length=95, Percent_Identity=40, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14494; Mature: 14494

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITVTTSKKIEFINITEEVKKALSQMELPQGNNKVHLFIPHTTAAITVNETADPDVCFD
CEEEEECCCCEEEEECHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEC
LENACQKIIPDISYQHLEGNSPAHFLSSLVGPDIMVPIRKNTLDLGRWQGIIFCEFDGPR
HHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCEEEEEECCEECCCCCCEEEEEEECCCC
RRKVKILY
CCEEEEEC
>Mature Secondary Structure
MEITVTTSKKIEFINITEEVKKALSQMELPQGNNKVHLFIPHTTAAITVNETADPDVCFD
CEEEEECCCCEEEEECHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEC
LENACQKIIPDISYQHLEGNSPAHFLSSLVGPDIMVPIRKNTLDLGRWQGIIFCEFDGPR
HHHHHHHHCCCCCEEECCCCCHHHHHHHHCCCCEEEEEECCEECCCCCCEEEEEEECCCC
RRKVKILY
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]