Click here to switch to the map view.

The map label for this gene is 188585707

Identifier: 188585707

GI number: 188585707

Start: 1139176

End: 1140075

Strand: Reverse

Name: 188585707

Synonym: Nther_1080

Alternate gene names: NA

Gene position: 1140075-1139176 (Counterclockwise)

Preceding gene: 188585715

Following gene: 188585706

Centisome position: 36.01

GC content: 41.11

Gene sequence:

>900_bases
GTGCGTAAAATATATTCACGGAAAAACAAATATTTGCTTTTGTTAATCACCCTGGCCTTATTAGCAACTTTCACATTAAC
AGCTTGCAATGACGGTGACCAAGATGAACCTAAAAATGGTACCCCTGGTGATGGAGAGGACGAAGGAGAACCTACTAATG
GAGAAGATGGAATGTTTTCTGCAGCTTCTGAAGCTGATGATAGAGGTTATGTTTATGCAGAAGTAACTTTAGAAAACGAT
CAAATCACCGATGTGGAACTGACAGAATTTAACGACAAAGGCCTTGCCAAAGGCGAAGATTACGGATGGGAACCTTGGCA
TGAAGCAATGGATGAACTTCCTGACCGATTTGTTGAAGCGAATTCTTCCGAAATTGAAGCTTACAGTGAAGCTACCACTA
CATCAAATAAAGCAATGGGAGCAGTAGATAAAGCAATACAAAAGTCAGAAGGCCAAGAAACTTTTGATGGCACGTTTATG
GGAACTTCCGAAATAGATAAAGATTTAGGTTGGGGAGTTGCTTGGGTTGTGGTAGAAGATGAGGAAATAACTGAAGTACA
ACTAGAAGAAGTCACGGTTGCAGACGAAGAGGAGGATGAAGAAGACAAGTATGAATTTAAAGACGACGATTATGACTGGG
AAGATTGGCAAGAAGCCAGAGAAACTATGCCCGATTGGTTTGAGGATGAAAATACATGGGATGTAGATATTTACACTGGT
GCTACCCAAAGTTCAGAAATGTGGAGAGAAGCCGTCAAAGATGCCCTTGAAAAAGCAGGTATCGCAGAAGATGTCGAAGA
CGATGCTGACGAAGACAATGACCAGGAAGATGATGAAGAACAACAAGAAGAAGAGGGCAATAATGATGAACAGGACGAAA
ATGATGACGAAGAAGAGTAA

Upstream 100 bases:

>100_bases
TATCTCTTGATTTTTGAACAAAGTGAGTTCAAAAAAATGTGTTATGAATTAGCTTAGCATGTGTAAAAACTAATTATGAT
TTTTCAAGGAGGTATAAACA

Downstream 100 bases:

>100_bases
TTTTAAAAAATGAGTCCTGATAAAGTTTCTTACAAATATTTACAATTTATTTGATATACTAGAAAGTCTACAAAAAGGTC
CTCACCCTAAAGAATGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRKIYSRKNKYLLLLITLALLATFTLTACNDGDQDEPKNGTPGDGEDEGEPTNGEDGMFSAASEADDRGYVYAEVTLEND
QITDVELTEFNDKGLAKGEDYGWEPWHEAMDELPDRFVEANSSEIEAYSEATTTSNKAMGAVDKAIQKSEGQETFDGTFM
GTSEIDKDLGWGVAWVVVEDEEITEVQLEEVTVADEEEDEEDKYEFKDDDYDWEDWQEARETMPDWFEDENTWDVDIYTG
ATQSSEMWREAVKDALEKAGIAEDVEDDADEDNDQEDDEEQQEEEGNNDEQDENDDEEE

Sequences:

>Translated_299_residues
MRKIYSRKNKYLLLLITLALLATFTLTACNDGDQDEPKNGTPGDGEDEGEPTNGEDGMFSAASEADDRGYVYAEVTLEND
QITDVELTEFNDKGLAKGEDYGWEPWHEAMDELPDRFVEANSSEIEAYSEATTTSNKAMGAVDKAIQKSEGQETFDGTFM
GTSEIDKDLGWGVAWVVVEDEEITEVQLEEVTVADEEEDEEDKYEFKDDDYDWEDWQEARETMPDWFEDENTWDVDIYTG
ATQSSEMWREAVKDALEKAGIAEDVEDDADEDNDQEDDEEQQEEEGNNDEQDENDDEEE
>Mature_299_residues
MRKIYSRKNKYLLLLITLALLATFTLTACNDGDQDEPKNGTPGDGEDEGEPTNGEDGMFSAASEADDRGYVYAEVTLEND
QITDVELTEFNDKGLAKGEDYGWEPWHEAMDELPDRFVEANSSEIEAYSEATTTSNKAMGAVDKAIQKSEGQETFDGTFM
GTSEIDKDLGWGVAWVVVEDEEITEVQLEEVTVADEEEDEEDKYEFKDDDYDWEDWQEARETMPDWFEDENTWDVDIYTG
ATQSSEMWREAVKDALEKAGIAEDVEDDADEDNDQEDDEEQQEEEGNNDEQDENDDEEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34002; Mature: 34002

Theoretical pI: Translated: 3.45; Mature: 3.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIYSRKNKYLLLLITLALLATFTLTACNDGDQDEPKNGTPGDGEDEGEPTNGEDGMFS
CCCCHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
AASEADDRGYVYAEVTLENDQITDVELTEFNDKGLAKGEDYGWEPWHEAMDELPDRFVEA
CCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
NSSEIEAYSEATTTSNKAMGAVDKAIQKSEGQETFDGTFMGTSEIDKDLGWGVAWVVVED
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHCCCCEEEEEECC
EEITEVQLEEVTVADEEEDEEDKYEFKDDDYDWEDWQEARETMPDWFEDENTWDVDIYTG
CCCCCEEHHHEEECCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCEEEEEEEC
ATQSSEMWREAVKDALEKAGIAEDVEDDADEDNDQEDDEEQQEEEGNNDEQDENDDEEE
CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKIYSRKNKYLLLLITLALLATFTLTACNDGDQDEPKNGTPGDGEDEGEPTNGEDGMFS
CCCCHHCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
AASEADDRGYVYAEVTLENDQITDVELTEFNDKGLAKGEDYGWEPWHEAMDELPDRFVEA
CCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
NSSEIEAYSEATTTSNKAMGAVDKAIQKSEGQETFDGTFMGTSEIDKDLGWGVAWVVVED
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHCCCCEEEEEECC
EEITEVQLEEVTVADEEEDEEDKYEFKDDDYDWEDWQEARETMPDWFEDENTWDVDIYTG
CCCCCEEHHHEEECCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCEEEEEEEC
ATQSSEMWREAVKDALEKAGIAEDVEDDADEDNDQEDDEEQQEEEGNNDEQDENDDEEE
CCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA