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The map label for this gene is 188585661

Identifier: 188585661

GI number: 188585661

Start: 1100262

End: 1101470

Strand: Reverse

Name: 188585661

Synonym: Nther_1034

Alternate gene names: NA

Gene position: 1101470-1100262 (Counterclockwise)

Preceding gene: 188585692

Following gene: 188585660

Centisome position: 34.8

GC content: 37.47

Gene sequence:

>1209_bases
ATGACTGATCCTGTACTAAGTATCGATGTTTCAAAAGAAAATAGTACTGCTGCTCTGTTTCTTTCTCAAGGTAATTTGAA
AGACAAAACCTTCACCTTTAAGCACACCCATAAGGAGTTATCTGAAGTTTTGGAGATCCTTAAGTCTACTGAAATAGAAA
CTGGTTCTAAAGCTAAAGTTGTTCTAGAGGCCACCGGAAACTACTCCACCCCTATTGTCAGTTTTTTTGAAACTAATGGA
TTTAAAGTTATATCATTGAATCCCATTGAAACCCACTTACAAAAAAATAAAGCTGTAAGAAAGGTTAAAACTGATGCTAT
TGATGTCGTTAGAATTGCCAATGTTTATTATCTTAAAGGAGATCAATTACAGTTTAGGATGGATGATCAGGCTAGAAATC
TACGAACTATGTGTAGACAGTATGATGGTATTTGTGAGGTGTTTAGCGAAACGCAGCTTAAATTTAGAGACTTTGTTGAA
ATGGTCTTTCCTATGTATAATGGGATTTTTTCTGATTTTTGTTCTAAAACTTCTCTAAATGTACTTTATCATTTCCCTTC
TCCAAATGCTGTACTTGAAGCTTCTAGAGAAGAGATAATCAAAGCTTTGAAATTGGCTAACATGCCTAAAAAGTGGTACC
AAGATAAGGTGGACATGCTTTACAATGCTGCCAGAGAAAGCCTATCTGTTAACCTGTCCCAAGGGCCTTTTGAAGAAGCT
ATCAAGGATTATATTTCTATCCTCAATAACTTAAGAGACAATTTGACCCGTATGCGGGATCGAATGGTTAAGCTTGCTAG
GCTTTCACCTCAATTTGAGCTCCTCCTCTCCATCCCAGGGGTAGGAGAAGTGACAGCTGCCACCATTCTTTCTGAAATCG
GTGACGTCCTTAACTTCCCTACTGTTAAACAACTAGTCGCTTTTTCAGGACTAGATCCCAGCGTTTTTCAGTCAGGAAGG
TTTAAGGCTACTAAAAACAAGATATCTAAAAGAGGATCGAATCATCTTAGAAAAGCTCTTTATCAGGCTACTGTTGCAGG
TATTAGAAAGAGAAAAGGAAAGCCTGTAAACCCCGTGATATTTGAGTTCTATTCTAAAAAGCTTTCCGAGGGTAAGGCGC
CTAATGTTGCAATTATTGCAGCTTCTAACAAGCTATTAAGAATAATTTATGGCATGTTGAAGAGTAGAACCATTTTCTCG
ACCTCTTGA

Upstream 100 bases:

>100_bases
CATATCCCGATTAAGCTGGTTGGGTATTTTAACCCGCATCACCGAGCGAACTTGTGAAGGATGGAAAGCTTCGGTCCCCC
AAATACAAAGGAGGAGTTCT

Downstream 100 bases:

>100_bases
TACAATATTACTCTATTTGAATCTATTTTGAAAGAGCAGTATTACACTAAAAAAACTTACTTGCTGGGTAGGTTTATTTG
GCATGGATTATTTTCTTATA

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTDPVLSIDVSKENSTAALFLSQGNLKDKTFTFKHTHKELSEVLEILKSTEIETGSKAKVVLEATGNYSTPIVSFFETNG
FKVISLNPIETHLQKNKAVRKVKTDAIDVVRIANVYYLKGDQLQFRMDDQARNLRTMCRQYDGICEVFSETQLKFRDFVE
MVFPMYNGIFSDFCSKTSLNVLYHFPSPNAVLEASREEIIKALKLANMPKKWYQDKVDMLYNAARESLSVNLSQGPFEEA
IKDYISILNNLRDNLTRMRDRMVKLARLSPQFELLLSIPGVGEVTAATILSEIGDVLNFPTVKQLVAFSGLDPSVFQSGR
FKATKNKISKRGSNHLRKALYQATVAGIRKRKGKPVNPVIFEFYSKKLSEGKAPNVAIIAASNKLLRIIYGMLKSRTIFS
TS

Sequences:

>Translated_402_residues
MTDPVLSIDVSKENSTAALFLSQGNLKDKTFTFKHTHKELSEVLEILKSTEIETGSKAKVVLEATGNYSTPIVSFFETNG
FKVISLNPIETHLQKNKAVRKVKTDAIDVVRIANVYYLKGDQLQFRMDDQARNLRTMCRQYDGICEVFSETQLKFRDFVE
MVFPMYNGIFSDFCSKTSLNVLYHFPSPNAVLEASREEIIKALKLANMPKKWYQDKVDMLYNAARESLSVNLSQGPFEEA
IKDYISILNNLRDNLTRMRDRMVKLARLSPQFELLLSIPGVGEVTAATILSEIGDVLNFPTVKQLVAFSGLDPSVFQSGR
FKATKNKISKRGSNHLRKALYQATVAGIRKRKGKPVNPVIFEFYSKKLSEGKAPNVAIIAASNKLLRIIYGMLKSRTIFS
TS
>Mature_401_residues
TDPVLSIDVSKENSTAALFLSQGNLKDKTFTFKHTHKELSEVLEILKSTEIETGSKAKVVLEATGNYSTPIVSFFETNGF
KVISLNPIETHLQKNKAVRKVKTDAIDVVRIANVYYLKGDQLQFRMDDQARNLRTMCRQYDGICEVFSETQLKFRDFVEM
VFPMYNGIFSDFCSKTSLNVLYHFPSPNAVLEASREEIIKALKLANMPKKWYQDKVDMLYNAARESLSVNLSQGPFEEAI
KDYISILNNLRDNLTRMRDRMVKLARLSPQFELLLSIPGVGEVTAATILSEIGDVLNFPTVKQLVAFSGLDPSVFQSGRF
KATKNKISKRGSNHLRKALYQATVAGIRKRKGKPVNPVIFEFYSKKLSEGKAPNVAIIAASNKLLRIIYGMLKSRTIFST
S

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 45340; Mature: 45209

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPVLSIDVSKENSTAALFLSQGNLKDKTFTFKHTHKELSEVLEILKSTEIETGSKAKV
CCCCEEEEEECCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEE
VLEATGNYSTPIVSFFETNGFKVISLNPIETHLQKNKAVRKVKTDAIDVVRIANVYYLKG
EEEECCCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEHEEEEEEC
DQLQFRMDDQARNLRTMCRQYDGICEVFSETQLKFRDFVEMVFPMYNGIFSDFCSKTSLN
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VLYHFPSPNAVLEASREEIIKALKLANMPKKWYQDKVDMLYNAARESLSVNLSQGPFEEA
EEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
IKDYISILNNLRDNLTRMRDRMVKLARLSPQFELLLSIPGVGEVTAATILSEIGDVLNFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC
TVKQLVAFSGLDPSVFQSGRFKATKNKISKRGSNHLRKALYQATVAGIRKRKGKPVNPVI
HHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FEFYSKKLSEGKAPNVAIIAASNKLLRIIYGMLKSRTIFSTS
HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCEECCC
>Mature Secondary Structure 
TDPVLSIDVSKENSTAALFLSQGNLKDKTFTFKHTHKELSEVLEILKSTEIETGSKAKV
CCCEEEEEECCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEE
VLEATGNYSTPIVSFFETNGFKVISLNPIETHLQKNKAVRKVKTDAIDVVRIANVYYLKG
EEEECCCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEHEEEEEEC
DQLQFRMDDQARNLRTMCRQYDGICEVFSETQLKFRDFVEMVFPMYNGIFSDFCSKTSLN
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VLYHFPSPNAVLEASREEIIKALKLANMPKKWYQDKVDMLYNAARESLSVNLSQGPFEEA
EEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
IKDYISILNNLRDNLTRMRDRMVKLARLSPQFELLLSIPGVGEVTAATILSEIGDVLNFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC
TVKQLVAFSGLDPSVFQSGRFKATKNKISKRGSNHLRKALYQATVAGIRKRKGKPVNPVI
HHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FEFYSKKLSEGKAPNVAIIAASNKLLRIIYGMLKSRTIFSTS
HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821490; 12000953 [H]