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The map label for this gene is yxaC [H]

Identifier: 188585637

GI number: 188585637

Start: 1076167

End: 1076847

Strand: Direct

Name: yxaC [H]

Synonym: Nther_1010

Alternate gene names: 188585637

Gene position: 1076167-1076847 (Clockwise)

Preceding gene: 188585636

Following gene: 188585638

Centisome position: 34.0

GC content: 37.74

Gene sequence:

>681_bases
ATGGAATTTCTAAATCAGCCAATTTTTGGTGTAGGGATGACAATCATCCCGTATATGATTTTTGTGTTATTGAAACAAAG
AGTTCCAATGGTAAATCCTTTTATTTTTACTACTACATTGATTATATTACTTTTATTAACCTTGGATATACCATATGATG
CTTACGAAGAAGGTGGGCGCATCATTGAGTTTATGCTAGCTCCCGCTACTATTGCCCTGGGTGTACCAATCTACAAAGAA
GCTCAAAGAATTAAGGATAATTTAGTTCCTATTTTGTTAGGAAATACTGTAGGAAGTTTAGTGGGGCTTGTTAGTGCTGG
GTTATTGGTCTTTATTTTAAGTGGAAATCAGGGATTGATGTTTTCTATGATGCCTAAATCGGCTACTACCCCAATATCAG
TAGAAATAGTTGCTAATTTGGGTGGGATGCCATCTTTAGGAGCTACATTTACTGTACTGACAGGTGTTTTTGGAAGCTTA
TTTGGTCCTGAGCTACTGAAAAAATGTGGGATCAGTGAAAATGAGTCTATTGGGGCTGCTATGGGGACATCTTCCCATGG
AATTGGAACGGCTAGAGTCGTGGCACAATCAGAAATTCAAGGGAGTATTAGTGCGTTTTCAATGGGTATGACAGGGATTA
TTACATCTATAATGGCCATCCCTTTATATTTGGTCTTCTAA

Upstream 100 bases:

>100_bases
ATAAGTCTTACTGTAAGTACAATTCTTGTTTTATTAGCTACTGGTATTACTGTCAAACTTGCCATATCTAGTAAATTAAG
CAAAAAAGGAGAGAACTGAT

Downstream 100 bases:

>100_bases
TTATTAGTCTTTCAAGTATGAAAGACTATTTTTTTACCATTTTTTAATATAAGCATTTATAAAATTTTAGCGGAAAAAAG
TATGGTTTTATAGTATAATA

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MEFLNQPIFGVGMTIIPYMIFVLLKQRVPMVNPFIFTTTLIILLLLTLDIPYDAYEEGGRIIEFMLAPATIALGVPIYKE
AQRIKDNLVPILLGNTVGSLVGLVSAGLLVFILSGNQGLMFSMMPKSATTPISVEIVANLGGMPSLGATFTVLTGVFGSL
FGPELLKKCGISENESIGAAMGTSSHGIGTARVVAQSEIQGSISAFSMGMTGIITSIMAIPLYLVF

Sequences:

>Translated_226_residues
MEFLNQPIFGVGMTIIPYMIFVLLKQRVPMVNPFIFTTTLIILLLLTLDIPYDAYEEGGRIIEFMLAPATIALGVPIYKE
AQRIKDNLVPILLGNTVGSLVGLVSAGLLVFILSGNQGLMFSMMPKSATTPISVEIVANLGGMPSLGATFTVLTGVFGSL
FGPELLKKCGISENESIGAAMGTSSHGIGTARVVAQSEIQGSISAFSMGMTGIITSIMAIPLYLVF
>Mature_226_residues
MEFLNQPIFGVGMTIIPYMIFVLLKQRVPMVNPFIFTTTLIILLLLTLDIPYDAYEEGGRIIEFMLAPATIALGVPIYKE
AQRIKDNLVPILLGNTVGSLVGLVSAGLLVFILSGNQGLMFSMMPKSATTPISVEIVANLGGMPSLGATFTVLTGVFGSL
FGPELLKKCGISENESIGAAMGTSSHGIGTARVVAQSEIQGSISAFSMGMTGIITSIMAIPLYLVF

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=195, Percent_Identity=31.7948717948718, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 23940; Mature: 23940

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLNQPIFGVGMTIIPYMIFVLLKQRVPMVNPFIFTTTLIILLLLTLDIPYDAYEEGGR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCC
IIEFMLAPATIALGVPIYKEAQRIKDNLVPILLGNTVGSLVGLVSAGLLVFILSGNQGLM
EEEHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHEEEEEECCCCEE
FSMMPKSATTPISVEIVANLGGMPSLGATFTVLTGVFGSLFGPELLKKCGISENESIGAA
EEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
MGTSSHGIGTARVVAQSEIQGSISAFSMGMTGIITSIMAIPLYLVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEFLNQPIFGVGMTIIPYMIFVLLKQRVPMVNPFIFTTTLIILLLLTLDIPYDAYEEGGR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCC
IIEFMLAPATIALGVPIYKEAQRIKDNLVPILLGNTVGSLVGLVSAGLLVFILSGNQGLM
EEEHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHEEEEEECCCCEE
FSMMPKSATTPISVEIVANLGGMPSLGATFTVLTGVFGSLFGPELLKKCGISENESIGAA
EEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
MGTSSHGIGTARVVAQSEIQGSISAFSMGMTGIITSIMAIPLYLVF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]