| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is pstS [H]
Identifier: 188585606
GI number: 188585606
Start: 1043094
End: 1044002
Strand: Direct
Name: pstS [H]
Synonym: Nther_0979
Alternate gene names: 188585606
Gene position: 1043094-1044002 (Clockwise)
Preceding gene: 188585605
Following gene: 188585607
Centisome position: 32.95
GC content: 37.29
Gene sequence:
>909_bases TTGAGGACTAAACTTATTTCTTTATCATTAGTTTTGATTTTAGGACTTTCAGTATTGAGTGGTTGTGGTAATGGGGATGA GGGCAGGGATCGTGCCCTAGAGATTCAAGGTTCGGATACTATGGTTAATTTAAACCAAACTTGGGCAGAAGAATATATGG ATAAAAATCAGGATAAACAAGTTTCAGTTACTGGTGGGGGGTCAGGAACTGGTATTTCTGCATTAATCAACGATAATGTT GATATTGCGGGTTCGTCCAGATATATGAAAGAAGAAGAGATTGAAGAAGCTCAAAATAATGATGTTAATGTCTATGAATT TAAAGTTGGTCAGGATGGACTGGCAGTTGGAGTGCATAAGAATAATCCTATCGATAAGATGACAGTGGATGAACTTAAAA AAGTTTTTACCGGTGAAGTGACAGAATGGTCCGAGCTAGGATGGGAAGATGGAGGTACAATTGAAGTGTACAGCCGCCAG AGTAATTCTGGAACTTATGTATATTTTAATGAGAATATTATGGATGGAGAAGACTGGGCTTCAGATACTCAATTTATGAG TGGTTCTTCTGCCATTAATGATGCTTTGCAAAATGATGAAAATGGAATAGGTTATTACGGAGTCGGATATGTGGATGGTG TTACAGCATTAGATGTGGCTGAAGATGAAGGATCTGAGTTTTATACTCCATTGGAGCAGGAGAACATTGATGATGGAGAC TATCCAATAGCAAGACCATTGTATTTTTACACTAATGGCGTTCCAGAAGAAGAAGTATTAGAGTTCCTCGAATTTGTGTT AAATGATGGACAAGATATAATCGGTGATGCTGGTTTCTATGCGCTTACTCCAGAATATGAAACTAAAAACGAAGAAATAT TTCAGGAATTAGATATTGAATTCGAGTAG
Upstream 100 bases:
>100_bases AATACTATCTTAATAATTCGTTAATTTGTCTTTAATATAGCTCATTTATAGTATAAGTAGAAACTAACTTGATTTAAATT ATTGGGAGGAGGAATTTAAC
Downstream 100 bases:
>100_bases ATTTTAAAGAGCTACAAATTAAAACTACCATAACCGCCCTGCAGTCTTTGTATTCACTTTTAAGACTAGGGCGGTTTATA ATTTTAACATTTTCTTAACA
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRTKLISLSLVLILGLSVLSGCGNGDEGRDRALEIQGSDTMVNLNQTWAEEYMDKNQDKQVSVTGGGSGTGISALINDNV DIAGSSRYMKEEEIEEAQNNDVNVYEFKVGQDGLAVGVHKNNPIDKMTVDELKKVFTGEVTEWSELGWEDGGTIEVYSRQ SNSGTYVYFNENIMDGEDWASDTQFMSGSSAINDALQNDENGIGYYGVGYVDGVTALDVAEDEGSEFYTPLEQENIDDGD YPIARPLYFYTNGVPEEEVLEFLEFVLNDGQDIIGDAGFYALTPEYETKNEEIFQELDIEFE
Sequences:
>Translated_302_residues MRTKLISLSLVLILGLSVLSGCGNGDEGRDRALEIQGSDTMVNLNQTWAEEYMDKNQDKQVSVTGGGSGTGISALINDNV DIAGSSRYMKEEEIEEAQNNDVNVYEFKVGQDGLAVGVHKNNPIDKMTVDELKKVFTGEVTEWSELGWEDGGTIEVYSRQ SNSGTYVYFNENIMDGEDWASDTQFMSGSSAINDALQNDENGIGYYGVGYVDGVTALDVAEDEGSEFYTPLEQENIDDGD YPIARPLYFYTNGVPEEEVLEFLEFVLNDGQDIIGDAGFYALTPEYETKNEEIFQELDIEFE >Mature_302_residues MRTKLISLSLVLILGLSVLSGCGNGDEGRDRALEIQGSDTMVNLNQTWAEEYMDKNQDKQVSVTGGGSGTGISALINDNV DIAGSSRYMKEEEIEEAQNNDVNVYEFKVGQDGLAVGVHKNNPIDKMTVDELKKVFTGEVTEWSELGWEDGGTIEVYSRQ SNSGTYVYFNENIMDGEDWASDTQFMSGSSAINDALQNDENGIGYYGVGYVDGVTALDVAEDEGSEFYTPLEQENIDDGD YPIARPLYFYTNGVPEEEVLEFLEFVLNDGQDIIGDAGFYALTPEYETKNEEIFQELDIEFE
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33436; Mature: 33436
Theoretical pI: Translated: 3.59; Mature: 3.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKLISLSLVLILGLSVLSGCGNGDEGRDRALEIQGSDTMVNLNQTWAEEYMDKNQDKQ CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECHHHHHHHHHCCCCCCE VSVTGGGSGTGISALINDNVDIAGSSRYMKEEEIEEAQNNDVNVYEFKVGQDGLAVGVHK EEEECCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEEC NNPIDKMTVDELKKVFTGEVTEWSELGWEDGGTIEVYSRQSNSGTYVYFNENIMDGEDWA CCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCC SDTQFMSGSSAINDALQNDENGIGYYGVGYVDGVTALDVAEDEGSEFYTPLEQENIDDGD CCHHHCCCCHHHHHHHHCCCCCCCEEECHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCC YPIARPLYFYTNGVPEEEVLEFLEFVLNDGQDIIGDAGFYALTPEYETKNEEIFQELDIE CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHCCCCCEEEECCCCCCCHHHHHHHCCCC FE CC >Mature Secondary Structure MRTKLISLSLVLILGLSVLSGCGNGDEGRDRALEIQGSDTMVNLNQTWAEEYMDKNQDKQ CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEECHHHHHHHHHCCCCCCE VSVTGGGSGTGISALINDNVDIAGSSRYMKEEEIEEAQNNDVNVYEFKVGQDGLAVGVHK EEEECCCCCCCEEEEECCCEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEEC NNPIDKMTVDELKKVFTGEVTEWSELGWEDGGTIEVYSRQSNSGTYVYFNENIMDGEDWA CCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCC SDTQFMSGSSAINDALQNDENGIGYYGVGYVDGVTALDVAEDEGSEFYTPLEQENIDDGD CCHHHCCCCHHHHHHHHCCCCCCCEEECHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCC YPIARPLYFYTNGVPEEEVLEFLEFVLNDGQDIIGDAGFYALTPEYETKNEEIFQELDIE CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHCCCCCEEEECCCCCCCHHHHHHHCCCC FE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA