| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188585585
Identifier: 188585585
GI number: 188585585
Start: 1013509
End: 1014780
Strand: Reverse
Name: 188585585
Synonym: Nther_0958
Alternate gene names: NA
Gene position: 1014780-1013509 (Counterclockwise)
Preceding gene: 188585586
Following gene: 188585581
Centisome position: 32.06
GC content: 39.78
Gene sequence:
>1272_bases TTGAATTACAAAAAAGTCTTCTTGTCTGCTGCAGTAGCATGCCTGATTGCTATTCCTAGCACTACTTCAGGAGCAGAGAC AGCCAAAATTGAGGTAGATGGTGAACAAATCCCAACAGAGGTACCACCTAAGATAGAAGATAGTAGAACAATGGTCCCTA TCAGAGTTATTAGTGAAAATTTAGGTGCTTATGTGGACTGGGATGGTGACACTAAAAGTGTACTAATAGCCCGTGAAGGT GGCACAATCTCTAACCCTCTAAACCAGTCTAGAGATGAAATTAGTCTAATAGTAAATGGTGAAATCATCTCAACGGACGT TTCTCCAAATATCGTAAATTCAAGAACTCTAGTACCAATAAGGGCTGCTAGTGAAGCTTTAGGCTCATACATACAGTGGG ATGGCGACACAAATACCGTCCGAGTTTTTACAGACTTTAACCAGGAAGAAGACAAAACAGAAGATGATACAGAAGATGAT AAAAAAGAAGATGATACTCAAGAAGACTTAGAAAGCCCAGAACAAGATAAGGGAGAAGATAGTGGACAAGATAGAGACAC AGATACTGAAGACGAAAACGATAGAAATGATTATGATGAAAAAGACCGTGAGAACGAAAAAGACAATAAAGAGGACAATG AGAAAGACGATCCAGAACAAGATGTCCCTGAAGACGATGAACAAATAGCTGATAATTGGACCCTTGAAGATTACAATAAT TATAACACCTCAAACTTTAGGGAAAATGAACTTTTCCACCAAAGTGTAGACTTCGATAATTTGGATTATCCCAGACTAAA TGCAGCTATTTTCTACGTTACCAATGAAATCCGTGCCGAACATAATTTGAGTGAATTAAAACATACCGTCGAACTAGAGA TTGCTGCCTGGAACCATTCAAAAAGCATGGCGGAACAGGAGTTTTTTAGCCATAACAACAGTTATAACAGTGACCGATAT AGTCCTTCCGACCGGGGAGAGCTGGCAGGAATACTTAATCCCAGTATAGCCGAAAACATTGCCATGAGTAGTTTTTATGA CGAAACTTACCTGTCAATGGCGGAAAATATTTTAGACATGTGGATGGATTCCGAAGGACATCGTGACAATATTCTATCTG AAAATGCCATTCAATTGGGCACTGGTGCTTACGATAGAGGAGGACAAGCTGGTCAATACGGAGGTGCAACTTTATATTTC ACCCAAAAATTCCAGTGGTACCAAGAAGTTGAATCAACCGATAGCACAGACCCTAGCCCCCATCAGTATTAA
Upstream 100 bases:
>100_bases CATAACTATGGGTTATTAAGTTCTCGCATCTAATGATGTAAAATCAGAGTAAGAAATATAGAAAACAATTGAACAAAAAA TTTGAAAGGAGTGTTTCTAT
Downstream 100 bases:
>100_bases TCTTTGTCTAGCTAACTTAACTATAACTAGCTAAAATGAATAAATATAATAACCTCCTTTTCCTGTTATAGGTTAAGGAG GTTATTTTTATAGATAATGA
Product: copper amine oxidase domain protein
Products: NA
Alternate protein names: Copper Amine Oxidase Domain-Containing Protein; Copper Amine Oxidase-Like Protein; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase/Autolysin; Copper Amine Oxidase-Like; Copper Amine Oxidase N- Domain Protein; SCP-Like Extracellular Protease; Peptidyl-Prolyl Cis-Trans Isomerase Cyclophilin-Type; Peptidase; Minor Extracellular Protease; Glycosyl Hydrolase; Protease; SCP-Like Extracellular; Amylopullulanase; Copper Amine Oxidase N- Domain Family
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MNYKKVFLSAAVACLIAIPSTTSGAETAKIEVDGEQIPTEVPPKIEDSRTMVPIRVISENLGAYVDWDGDTKSVLIAREG GTISNPLNQSRDEISLIVNGEIISTDVSPNIVNSRTLVPIRAASEALGSYIQWDGDTNTVRVFTDFNQEEDKTEDDTEDD KKEDDTQEDLESPEQDKGEDSGQDRDTDTEDENDRNDYDEKDRENEKDNKEDNEKDDPEQDVPEDDEQIADNWTLEDYNN YNTSNFRENELFHQSVDFDNLDYPRLNAAIFYVTNEIRAEHNLSELKHTVELEIAAWNHSKSMAEQEFFSHNNSYNSDRY SPSDRGELAGILNPSIAENIAMSSFYDETYLSMAENILDMWMDSEGHRDNILSENAIQLGTGAYDRGGQAGQYGGATLYF TQKFQWYQEVESTDSTDPSPHQY
Sequences:
>Translated_423_residues MNYKKVFLSAAVACLIAIPSTTSGAETAKIEVDGEQIPTEVPPKIEDSRTMVPIRVISENLGAYVDWDGDTKSVLIAREG GTISNPLNQSRDEISLIVNGEIISTDVSPNIVNSRTLVPIRAASEALGSYIQWDGDTNTVRVFTDFNQEEDKTEDDTEDD KKEDDTQEDLESPEQDKGEDSGQDRDTDTEDENDRNDYDEKDRENEKDNKEDNEKDDPEQDVPEDDEQIADNWTLEDYNN YNTSNFRENELFHQSVDFDNLDYPRLNAAIFYVTNEIRAEHNLSELKHTVELEIAAWNHSKSMAEQEFFSHNNSYNSDRY SPSDRGELAGILNPSIAENIAMSSFYDETYLSMAENILDMWMDSEGHRDNILSENAIQLGTGAYDRGGQAGQYGGATLYF TQKFQWYQEVESTDSTDPSPHQY >Mature_423_residues MNYKKVFLSAAVACLIAIPSTTSGAETAKIEVDGEQIPTEVPPKIEDSRTMVPIRVISENLGAYVDWDGDTKSVLIAREG GTISNPLNQSRDEISLIVNGEIISTDVSPNIVNSRTLVPIRAASEALGSYIQWDGDTNTVRVFTDFNQEEDKTEDDTEDD KKEDDTQEDLESPEQDKGEDSGQDRDTDTEDENDRNDYDEKDRENEKDNKEDNEKDDPEQDVPEDDEQIADNWTLEDYNN YNTSNFRENELFHQSVDFDNLDYPRLNAAIFYVTNEIRAEHNLSELKHTVELEIAAWNHSKSMAEQEFFSHNNSYNSDRY SPSDRGELAGILNPSIAENIAMSSFYDETYLSMAENILDMWMDSEGHRDNILSENAIQLGTGAYDRGGQAGQYGGATLYF TQKFQWYQEVESTDSTDPSPHQY
Specific function: Unknown
COG id: COG2340
COG function: function code S; Uncharacterized protein with SCP/PR1 domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47949; Mature: 47949
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKKVFLSAAVACLIAIPSTTSGAETAKIEVDGEQIPTEVPPKIEDSRTMVPIRVISEN CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHEEECCC LGAYVDWDGDTKSVLIAREGGTISNPLNQSRDEISLIVNGEIISTDVSPNIVNSRTLVPI CCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEECCCCCEECCCEEEEE RAASEALGSYIQWDGDTNTVRVFTDFNQEEDKTEDDTEDDKKEDDTQEDLESPEQDKGED HHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC SGQDRDTDTEDENDRNDYDEKDRENEKDNKEDNEKDDPEQDVPEDDEQIADNWTLEDYNN CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC YNTSNFRENELFHQSVDFDNLDYPRLNAAIFYVTNEIRAEHNLSELKHTVELEIAAWNHS CCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHCCHHHHCEEEEEEEEEECCH KSMAEQEFFSHNNSYNSDRYSPSDRGELAGILNPSIAENIAMSSFYDETYLSMAENILDM HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WMDSEGHRDNILSENAIQLGTGAYDRGGQAGQYGGATLYFTQKFQWYQEVESTDSTDPSP HCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCC HQY CCC >Mature Secondary Structure MNYKKVFLSAAVACLIAIPSTTSGAETAKIEVDGEQIPTEVPPKIEDSRTMVPIRVISEN CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEHEEECCC LGAYVDWDGDTKSVLIAREGGTISNPLNQSRDEISLIVNGEIISTDVSPNIVNSRTLVPI CCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEECCCCCEECCCEEEEE RAASEALGSYIQWDGDTNTVRVFTDFNQEEDKTEDDTEDDKKEDDTQEDLESPEQDKGED HHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC SGQDRDTDTEDENDRNDYDEKDRENEKDNKEDNEKDDPEQDVPEDDEQIADNWTLEDYNN CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC YNTSNFRENELFHQSVDFDNLDYPRLNAAIFYVTNEIRAEHNLSELKHTVELEIAAWNHS CCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHCCHHHHCEEEEEEEEEECCH KSMAEQEFFSHNNSYNSDRYSPSDRGELAGILNPSIAENIAMSSFYDETYLSMAENILDM HHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WMDSEGHRDNILSENAIQLGTGAYDRGGQAGQYGGATLYFTQKFQWYQEVESTDSTDPSP HCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCC HQY CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA