Click here to switch to the map view.

The map label for this gene is degV [H]

Identifier: 188585531

GI number: 188585531

Start: 954297

End: 955145

Strand: Direct

Name: degV [H]

Synonym: Nther_0903

Alternate gene names: 188585531

Gene position: 954297-955145 (Clockwise)

Preceding gene: 188585529

Following gene: 188585532

Centisome position: 30.15

GC content: 38.04

Gene sequence:

>849_bases
TTGCAAAAAATTGGTATTGTGACAGACAGTACAGCGGATATTCCTGAAAATTTGCGTGAGAAACATAACATCCATGTGAT
ACCGTTATCAGTAGTTCACGGTGATACAGTTTATCGGGATGGTGTAGATATTGATTCAGAAAATTTTTATGAGTTGCTAG
AAAATAGTGATACTATTCCGCAATCTTCTCAGCCTACACCTCAAGATTTTGAAAATCTCTATAAAAATTTATTGGGAAAA
TATGAAGAAATAATCTCAGTTCATTTATCGGCCGGATTAAGTGGTACCATTAATGCCGCCGAGCAGGCAGGCAAATTGTT
CCAGAACAGGGTACATGTATTTGATTCCAAAGGGATTAGTGCCGGGATAGGTTTACAGGTTATAGAAGCAGCTAAAAAAA
TTCAAGAAGGCTGGGAAACAGAAAAAGTGATGGAATTTTTAGGATCTTTAAGAAACAATGTTGAAACCTTGTTTACTCTT
GACACTTTAGAATATCTACATAAAGGTGGGCGTATTGGTAAAGTTTCATCTATGTTGGGGTCATTCTTAAATATCAAACC
AATTGTGAGAGTTGAAGACGGAAAATTTGTCCCCTACGGTAAGGCTAGAAGTAGGCGAACCGCCTTGAATAAAATTGTTA
ACAATTTAGAAACTTTTGCAGAAAATCGGGTACCCTGGAAACTAGCTATTGCTCATGGACAGGGTAAAGAGGGTGCTGAT
TTTTTAAAGGAAGTGCTCGATGAAAAATTCGGAATAGAGGCGGATATTTATACTACAATCGGCCCTGTTATTGGAGTACA
TACTGGACCTGGAACTTCTGGGGCAGCTGTCATGTTTAGTCCGGAATAA

Upstream 100 bases:

>100_bases
TTTTTGCAGACCTCGTAATTCATGATGTATAATATAGACAATAAGTAGTGTAAATTAATATGGCTATTATGCTATTATCT
ATAGAAGAGGAGGTAAAATT

Downstream 100 bases:

>100_bases
AAGTGCAATGAGGTGGTGTTATTGCACATGGAAAGGAGAAAATTCCTTTCTAAGACTGGAAAAATATTAGGGTTAAGTTC
TACTTTGTCTGCTTTGTTAT

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MQKIGIVTDSTADIPENLREKHNIHVIPLSVVHGDTVYRDGVDIDSENFYELLENSDTIPQSSQPTPQDFENLYKNLLGK
YEEIISVHLSAGLSGTINAAEQAGKLFQNRVHVFDSKGISAGIGLQVIEAAKKIQEGWETEKVMEFLGSLRNNVETLFTL
DTLEYLHKGGRIGKVSSMLGSFLNIKPIVRVEDGKFVPYGKARSRRTALNKIVNNLETFAENRVPWKLAIAHGQGKEGAD
FLKEVLDEKFGIEADIYTTIGPVIGVHTGPGTSGAAVMFSPE

Sequences:

>Translated_282_residues
MQKIGIVTDSTADIPENLREKHNIHVIPLSVVHGDTVYRDGVDIDSENFYELLENSDTIPQSSQPTPQDFENLYKNLLGK
YEEIISVHLSAGLSGTINAAEQAGKLFQNRVHVFDSKGISAGIGLQVIEAAKKIQEGWETEKVMEFLGSLRNNVETLFTL
DTLEYLHKGGRIGKVSSMLGSFLNIKPIVRVEDGKFVPYGKARSRRTALNKIVNNLETFAENRVPWKLAIAHGQGKEGAD
FLKEVLDEKFGIEADIYTTIGPVIGVHTGPGTSGAAVMFSPE
>Mature_282_residues
MQKIGIVTDSTADIPENLREKHNIHVIPLSVVHGDTVYRDGVDIDSENFYELLENSDTIPQSSQPTPQDFENLYKNLLGK
YEEIISVHLSAGLSGTINAAEQAGKLFQNRVHVFDSKGISAGIGLQVIEAAKKIQEGWETEKVMEFLGSLRNNVETLFTL
DTLEYLHKGGRIGKVSSMLGSFLNIKPIVRVEDGKFVPYGKARSRRTALNKIVNNLETFAENRVPWKLAIAHGQGKEGAD
FLKEVLDEKFGIEADIYTTIGPVIGVHTGPGTSGAAVMFSPE

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 30995; Mature: 30995

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIGIVTDSTADIPENLREKHNIHVIPLSVVHGDTVYRDGVDIDSENFYELLENSDTIP
CCCCCEEECCCCCCHHHHHHHCCEEEEEEEEEECCEEEECCCCCCHHHHHHHHHCCCCCC
QSSQPTPQDFENLYKNLLGKYEEIISVHLSAGLSGTINAAEQAGKLFQNRVHVFDSKGIS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
AGIGLQVIEAAKKIQEGWETEKVMEFLGSLRNNVETLFTLDTLEYLHKGGRIGKVSSMLG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
SFLNIKPIVRVEDGKFVPYGKARSRRTALNKIVNNLETFAENRVPWKLAIAHGQGKEGAD
HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
FLKEVLDEKFGIEADIYTTIGPVIGVHTGPGTSGAAVMFSPE
HHHHHHHHHHCCCEEHHHHHCCHHEECCCCCCCCCEEEECCC
>Mature Secondary Structure
MQKIGIVTDSTADIPENLREKHNIHVIPLSVVHGDTVYRDGVDIDSENFYELLENSDTIP
CCCCCEEECCCCCCHHHHHHHCCEEEEEEEEEECCEEEECCCCCCHHHHHHHHHCCCCCC
QSSQPTPQDFENLYKNLLGKYEEIISVHLSAGLSGTINAAEQAGKLFQNRVHVFDSKGIS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
AGIGLQVIEAAKKIQEGWETEKVMEFLGSLRNNVETLFTLDTLEYLHKGGRIGKVSSMLG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
SFLNIKPIVRVEDGKFVPYGKARSRRTALNKIVNNLETFAENRVPWKLAIAHGQGKEGAD
HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
FLKEVLDEKFGIEADIYTTIGPVIGVHTGPGTSGAAVMFSPE
HHHHHHHHHHCCCEEHHHHHCCHHEECCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378 [H]