| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is wrbA [H]
Identifier: 188585508
GI number: 188585508
Start: 927569
End: 928045
Strand: Direct
Name: wrbA [H]
Synonym: Nther_0880
Alternate gene names: 188585508
Gene position: 927569-928045 (Clockwise)
Preceding gene: 188585507
Following gene: 188585511
Centisome position: 29.3
GC content: 42.14
Gene sequence:
>477_bases ATGACTAAGATTTTGGTAGCCTACTTTAGTCAAACAGGTAATACTCAAAAAATGGCTAAAGCGGTAAGTGAAGGGGCTGA GCAAGCTGGTGCTGAAGTTGATGTTCTGAATGTACAACAAATCGAAGATCTAAATTCACTTACAAATTACGATGGCATCA TTATGGGATCGCCTACATACTATGGGATAATGGCAAATCAAGTTAAGGAGTTCCTAGACAAAAGTATCAAAGTACATGGC AAACTTGAAGGAAAAGTAGGTGGAGCTTTTGCATCCTGTGGCATCGATGGTGGTGGTTCCGAGAGTACGGTATTAAGTAT TATTCAAGCTTTATTGGTACATGGTATGATAGTTCCCGGGTTCAGCAAAATTGGTCACTACGGCCCAGTGACTACCGGAG AACCGGATGACCGTGCAATTTCCGAGTGCAAACAGCTGGGAGAAAGAGTAGCTAACTTAGCTGACAAAGTGAGCTAA
Upstream 100 bases:
>100_bases GGAATGTTCAGTACCCCTGGATAACTCAAAAGGAGTGGGATTATCGTTCACAGGAGGGGTTGATTGTTAAATTGTAAAAT ATATCAAGGAGGGATCTTTT
Downstream 100 bases:
>100_bases ATCTGATTTAAATTTCGTTTATAGCTCTCGTTCAAAAGTTCAAAGTAATTATGGGCTGTCACAAGACAGCCCATTTTTTT ATAAGATACTGTGTATTTGA
Product: flavodoxin/nitric oxide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTKILVAYFSQTGNTQKMAKAVSEGAEQAGAEVDVLNVQQIEDLNSLTNYDGIIMGSPTYYGIMANQVKEFLDKSIKVHG KLEGKVGGAFASCGIDGGGSESTVLSIIQALLVHGMIVPGFSKIGHYGPVTTGEPDDRAISECKQLGERVANLADKVS
Sequences:
>Translated_158_residues MTKILVAYFSQTGNTQKMAKAVSEGAEQAGAEVDVLNVQQIEDLNSLTNYDGIIMGSPTYYGIMANQVKEFLDKSIKVHG KLEGKVGGAFASCGIDGGGSESTVLSIIQALLVHGMIVPGFSKIGHYGPVTTGEPDDRAISECKQLGERVANLADKVS >Mature_157_residues TKILVAYFSQTGNTQKMAKAVSEGAEQAGAEVDVLNVQQIEDLNSLTNYDGIIMGSPTYYGIMANQVKEFLDKSIKVHGK LEGKVGGAFASCGIDGGGSESTVLSIIQALLVHGMIVPGFSKIGHYGPVTTGEPDDRAISECKQLGERVANLADKVS
Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1787239, Length=202, Percent_Identity=33.6633663366337, Blast_Score=84, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319849, Length=139, Percent_Identity=33.0935251798561, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320235, Length=141, Percent_Identity=30.4964539007092, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR010089 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 16638; Mature: 16507
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKILVAYFSQTGNTQKMAKAVSEGAEQAGAEVDVLNVQQIEDLNSLTNYDGIIMGSPTY CCCEEEEEHHCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCEEECCCCH YGIMANQVKEFLDKSIKVHGKLEGKVGGAFASCGIDGGGSESTVLSIIQALLVHGMIVPG HHHHHHHHHHHHHHHHEECCEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC FSKIGHYGPVTTGEPDDRAISECKQLGERVANLADKVS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKILVAYFSQTGNTQKMAKAVSEGAEQAGAEVDVLNVQQIEDLNSLTNYDGIIMGSPTY CCEEEEEHHCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCEEECCCCH YGIMANQVKEFLDKSIKVHGKLEGKVGGAFASCGIDGGGSESTVLSIIQALLVHGMIVPG HHHHHHHHHHHHHHHHEECCEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCC FSKIGHYGPVTTGEPDDRAISECKQLGERVANLADKVS HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA