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The map label for this gene is gerKB [H]

Identifier: 188585501

GI number: 188585501

Start: 921366

End: 922454

Strand: Reverse

Name: gerKB [H]

Synonym: Nther_0873

Alternate gene names: 188585501

Gene position: 922454-921366 (Counterclockwise)

Preceding gene: 188585502

Following gene: 188585500

Centisome position: 29.14

GC content: 37.56

Gene sequence:

>1089_bases
ATGTTTACTAATGAACGGGTGTCTGGGATACAAGCAGTGATATTAACTGCCGCTGCCGCTCTAGGGACCATATTTCTTGA
CATACCTATAATCGCTATTGAAGAAGGTGGGCTCCAAGGGTGGCTTAGCATCCTACCAGGATATTCCCTAATGATAATTG
GTGTTTATGCTGTAGTCAAGCTTGGCGAAAAATATCCCAACGAAACAGTTATTCAATATGCCCCGAATGTAGTGGGAACA
ATGATAGGAAAGCTTTTTGGTTTGACTTTGATAATCACCTTCACTGTTTTTGCAGGGTTCTTGGTCCGGTTAAACTCCGA
ACTATTACTACTTTTAATGCCCGAAACTCCTGCAGTTGCCTTTAAAGTACTTATTGTAAGTCTAGCTATTTATTCGATGA
AATCAGGTTTTGAGGTTTTTGCTCGCGCTTGTCAATTATTAGTTCCTTTAATAATTTTAGGTCTAATATTGGTTTTTATT
TTCAGCTTGGAAAATATTGAATTAGATAACTTTTTACCATTATTTGAAGAAGGTTATTTAGAGCCTTTGGGGTTTTTGCC
AAATGCGATGGCCTTATCAGGTGAAGCTGTGCTCTTTATGGCTTTTTGGTATTGTACCCTGAACACAAAAGAAGAAGGAT
TACGAGCTGGAGCTATTGGATTGGTAAGCATGGGGTTACTACTAACTGTAACTGTATTAGTCACTATAGGTTCTTTAGGG
CCCGATAAAGTATTAAATCACAATTTCCCGATATTTTCACTAACCAGGTTTATCTTGGTATTAGAATTTATGCAGGGCTA
CGAGGGACTTTTGACTATAGTATGGGTTTCTGCTTCATTTATTAAAGTAACAATCTTTTTATATCCAGCAGTGGTTGGTG
CTTCCCAGTGGCTCAACCTACAGGATTACAAGCCCTTAGTTTTTCCATTCGCCCTATTAGTAATAAGTGCAGCCTATGTA
CCAGAAACTAAAGGAGATGTTGATGAAATGATAGGTTTAATTAACTTGTATGCAATTCTACCTTTAGCGTTCTTTTTACT
AATTATGGCTATCATTGAAGGAGTGAAAACGAAATTGCAAAACCAGTAA

Upstream 100 bases:

>100_bases
CATTTTTTGTATTGTTATTAAGTGGTACTGTCCTACTAATATTCCATTTATTTTAGGTGATGCTTGGATTAGGAAGCATA
GATTAGGAGGCATTAGTTTA

Downstream 100 bases:

>100_bases
TAATGTAATTAACATTTTTTAGAGCTTGTATTCCCCATATCCTTAAAGTATACTAAGATTTAAAGAAATTCTTGTTAGAA
AGATCAAACTATAACACCGA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MFTNERVSGIQAVILTAAAALGTIFLDIPIIAIEEGGLQGWLSILPGYSLMIIGVYAVVKLGEKYPNETVIQYAPNVVGT
MIGKLFGLTLIITFTVFAGFLVRLNSELLLLLMPETPAVAFKVLIVSLAIYSMKSGFEVFARACQLLVPLIILGLILVFI
FSLENIELDNFLPLFEEGYLEPLGFLPNAMALSGEAVLFMAFWYCTLNTKEEGLRAGAIGLVSMGLLLTVTVLVTIGSLG
PDKVLNHNFPIFSLTRFILVLEFMQGYEGLLTIVWVSASFIKVTIFLYPAVVGASQWLNLQDYKPLVFPFALLVISAAYV
PETKGDVDEMIGLINLYAILPLAFFLLIMAIIEGVKTKLQNQ

Sequences:

>Translated_362_residues
MFTNERVSGIQAVILTAAAALGTIFLDIPIIAIEEGGLQGWLSILPGYSLMIIGVYAVVKLGEKYPNETVIQYAPNVVGT
MIGKLFGLTLIITFTVFAGFLVRLNSELLLLLMPETPAVAFKVLIVSLAIYSMKSGFEVFARACQLLVPLIILGLILVFI
FSLENIELDNFLPLFEEGYLEPLGFLPNAMALSGEAVLFMAFWYCTLNTKEEGLRAGAIGLVSMGLLLTVTVLVTIGSLG
PDKVLNHNFPIFSLTRFILVLEFMQGYEGLLTIVWVSASFIKVTIFLYPAVVGASQWLNLQDYKPLVFPFALLVISAAYV
PETKGDVDEMIGLINLYAILPLAFFLLIMAIIEGVKTKLQNQ
>Mature_362_residues
MFTNERVSGIQAVILTAAAALGTIFLDIPIIAIEEGGLQGWLSILPGYSLMIIGVYAVVKLGEKYPNETVIQYAPNVVGT
MIGKLFGLTLIITFTVFAGFLVRLNSELLLLLMPETPAVAFKVLIVSLAIYSMKSGFEVFARACQLLVPLIILGLILVFI
FSLENIELDNFLPLFEEGYLEPLGFLPNAMALSGEAVLFMAFWYCTLNTKEEGLRAGAIGLVSMGLLLTVTVLVTIGSLG
PDKVLNHNFPIFSLTRFILVLEFMQGYEGLLTIVWVSASFIKVTIFLYPAVVGASQWLNLQDYKPLVFPFALLVISAAYV
PETKGDVDEMIGLINLYAILPLAFFLLIMAIIEGVKTKLQNQ

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 39621; Mature: 39621

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTNERVSGIQAVILTAAAALGTIFLDIPIIAIEEGGLQGWLSILPGYSLMIIGVYAVVK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHH
LGEKYPNETVIQYAPNVVGTMIGKLFGLTLIITFTVFAGFLVRLNSELLLLLMPETPAVA
HHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
FKVLIVSLAIYSMKSGFEVFARACQLLVPLIILGLILVFIFSLENIELDNFLPLFEEGYL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCC
EPLGFLPNAMALSGEAVLFMAFWYCTLNTKEEGLRAGAIGLVSMGLLLTVTVLVTIGSLG
CHHHCCCCCHHCCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDKVLNHNFPIFSLTRFILVLEFMQGYEGLLTIVWVSASFIKVTIFLYPAVVGASQWLNL
CHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QDYKPLVFPFALLVISAAYVPETKGDVDEMIGLINLYAILPLAFFLLIMAIIEGVKTKLQ
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQ
CC
>Mature Secondary Structure
MFTNERVSGIQAVILTAAAALGTIFLDIPIIAIEEGGLQGWLSILPGYSLMIIGVYAVVK
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHH
LGEKYPNETVIQYAPNVVGTMIGKLFGLTLIITFTVFAGFLVRLNSELLLLLMPETPAVA
HHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
FKVLIVSLAIYSMKSGFEVFARACQLLVPLIILGLILVFIFSLENIELDNFLPLFEEGYL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCC
EPLGFLPNAMALSGEAVLFMAFWYCTLNTKEEGLRAGAIGLVSMGLLLTVTVLVTIGSLG
CHHHCCCCCHHCCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDKVLNHNFPIFSLTRFILVLEFMQGYEGLLTIVWVSASFIKVTIFLYPAVVGASQWLNL
CHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QDYKPLVFPFALLVISAAYVPETKGDVDEMIGLINLYAILPLAFFLLIMAIIEGVKTKLQ
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]