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The map label for this gene is yidE [C]

Identifier: 188585498

GI number: 188585498

Start: 917526

End: 919130

Strand: Reverse

Name: yidE [C]

Synonym: Nther_0870

Alternate gene names: 188585498

Gene position: 919130-917526 (Counterclockwise)

Preceding gene: 188585500

Following gene: 188585489

Centisome position: 29.04

GC content: 38.63

Gene sequence:

>1605_bases
ATGTCGATATTCCATGAAACACCAGTATTAACAATATTCACTATCATTTTATTGGGATTATTACTGGGAAGCATACAATT
CAAAGGTTTGAAATTAGGAGCTTCAGGAGTTCTATTGGTTGCATTATTAATGGGACATTTTGGCTTTGAAATACCTAAGG
TAGCTCAGGATTTAGGACTTGCTTTATTTGTACTCTCGGTAGGTTTAAAAGCGGGGCCTAGATTTTTCCGAATGCTAAAA
CGTAAAGGTATAGCATTCAGCGGAATAGGACTTGCTATAGTTATCTCTACCGGTTTAATTACATTAATGTTATCAAAATT
ATTAAACATTCCAGCACCCCTTGGCATAGGATTGATGACAGGTGCCCTAACAAGTACACCGGGACTGGCAGCTGCCATTG
AAGCCACCGGAGACCCTATGGCTTCTGTTGGTTATGGGATTGCCTATCCCTTTGGTGTCATTGCAGTTGTTATGTTTGTC
CAACTGGTTCCCAAAATTAAAAAAGACAGCTTTTTAGAAGCTTTACAGAGTGCTGAAGCAGATAAAGAAAGGAAACAACA
GAGAAAGAACCTGATTTCCAAAGCTTTCAGAGTAGAAAACCCTGAACTACATAAGAAAACTTTAGCGGAAATCAAACTTC
AAAAAAAGGCTGAAGTAATTATCAGCAGGATTTTTAGACACGATAGGAGTTTTGTCGGCAGAAATGATGCTGTGCTATTA
CAGGGTGATCACATTAATGTTGTAGGCACTTCCGAAGAACTCAAAAAGGTTGATGATTATTTTGGACCTAGTGTAGAAAT
TAATGATAAAACAAAGGAAGAAACAGATACAGAAGTTGAAAACATTATTATGAATAGGGATGATTTAGCAGGGAAAACCC
TGCAAGAGTTAAACCTAAGACATAATCCAGGTGTAACGATTACCAGAGTAGAGCGTAGTGGTATAGAATTTTTACCTAAA
CCCGGAAAAACACTTGATAAGGGTGATATTTGTACCGCAGTAGGGACAGATAAATCTTTAAAAGAACTAAAAGATTTGTT
TGCCTCGAAACATCTGCAGGTATCCGATGTAGACATGCTTCCTATTAGTGTTTTCCTATTGAGCGGAATCTTACTGGGAA
TGATACCTATATTTATTCCAGGACTTGGTACTATACAAATTGGAGTAGCAGGAGGTCCCTTATTTGCAGGGTTAATCGCA
TCTCACTTTGGAAGGATCGGACCTCTAAAGGCCAGATTTAATAGTTCAGGTTTAAATACCATCAATAGCTTGGGCTTAAC
TCTCTTTTTGGCAGGAGCCGGAACTTCCGCCGGCTCAGATCTTGTTACAGTCATAGCGAAACACGGTATTGGAATATTTG
CCAGTGGGGCAGTTATCACCCTGGTACCTTTAATCATTTCTGCATGGCTAGTTCAAAGAGTATTTAAACTGAATTTGGTG
CATGGTTTAGGTGCTATTTGTGGTGGTATGACAAGTACTCCTGGATTAGGAGCTTTAAATGATATTACTGATTCAGAAGA
ACCTTCCGTCGCCTATGCAGCTGTTTATCCACTAGCTTTAATACTTGTAGCAATTTCATCCCAGTTATTAGCACTTCTTA
TTTAA

Upstream 100 bases:

>100_bases
TTTAAACATTGCCAAACTCCCATAACTAAAGCGGTGGGCTTTCTGCTGCTGTTTATCGTAAAATTTTTATTTAATTTATA
AATATGGAGGAATTTCTACA

Downstream 100 bases:

>100_bases
ATTTTATTATTTATCACCCTCGTTTGTTTCAGTTTTGTCTGTAGCTAGGTTAGTTGTCCTAATAAGATGAACCCTAAAAA
ATAAAACTATACGATGCTAA

Product: YidE/YbjL duplication

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MSIFHETPVLTIFTIILLGLLLGSIQFKGLKLGASGVLLVALLMGHFGFEIPKVAQDLGLALFVLSVGLKAGPRFFRMLK
RKGIAFSGIGLAIVISTGLITLMLSKLLNIPAPLGIGLMTGALTSTPGLAAAIEATGDPMASVGYGIAYPFGVIAVVMFV
QLVPKIKKDSFLEALQSAEADKERKQQRKNLISKAFRVENPELHKKTLAEIKLQKKAEVIISRIFRHDRSFVGRNDAVLL
QGDHINVVGTSEELKKVDDYFGPSVEINDKTKEETDTEVENIIMNRDDLAGKTLQELNLRHNPGVTITRVERSGIEFLPK
PGKTLDKGDICTAVGTDKSLKELKDLFASKHLQVSDVDMLPISVFLLSGILLGMIPIFIPGLGTIQIGVAGGPLFAGLIA
SHFGRIGPLKARFNSSGLNTINSLGLTLFLAGAGTSAGSDLVTVIAKHGIGIFASGAVITLVPLIISAWLVQRVFKLNLV
HGLGAICGGMTSTPGLGALNDITDSEEPSVAYAAVYPLALILVAISSQLLALLI

Sequences:

>Translated_534_residues
MSIFHETPVLTIFTIILLGLLLGSIQFKGLKLGASGVLLVALLMGHFGFEIPKVAQDLGLALFVLSVGLKAGPRFFRMLK
RKGIAFSGIGLAIVISTGLITLMLSKLLNIPAPLGIGLMTGALTSTPGLAAAIEATGDPMASVGYGIAYPFGVIAVVMFV
QLVPKIKKDSFLEALQSAEADKERKQQRKNLISKAFRVENPELHKKTLAEIKLQKKAEVIISRIFRHDRSFVGRNDAVLL
QGDHINVVGTSEELKKVDDYFGPSVEINDKTKEETDTEVENIIMNRDDLAGKTLQELNLRHNPGVTITRVERSGIEFLPK
PGKTLDKGDICTAVGTDKSLKELKDLFASKHLQVSDVDMLPISVFLLSGILLGMIPIFIPGLGTIQIGVAGGPLFAGLIA
SHFGRIGPLKARFNSSGLNTINSLGLTLFLAGAGTSAGSDLVTVIAKHGIGIFASGAVITLVPLIISAWLVQRVFKLNLV
HGLGAICGGMTSTPGLGALNDITDSEEPSVAYAAVYPLALILVAISSQLLALLI
>Mature_533_residues
SIFHETPVLTIFTIILLGLLLGSIQFKGLKLGASGVLLVALLMGHFGFEIPKVAQDLGLALFVLSVGLKAGPRFFRMLKR
KGIAFSGIGLAIVISTGLITLMLSKLLNIPAPLGIGLMTGALTSTPGLAAAIEATGDPMASVGYGIAYPFGVIAVVMFVQ
LVPKIKKDSFLEALQSAEADKERKQQRKNLISKAFRVENPELHKKTLAEIKLQKKAEVIISRIFRHDRSFVGRNDAVLLQ
GDHINVVGTSEELKKVDDYFGPSVEINDKTKEETDTEVENIIMNRDDLAGKTLQELNLRHNPGVTITRVERSGIEFLPKP
GKTLDKGDICTAVGTDKSLKELKDLFASKHLQVSDVDMLPISVFLLSGILLGMIPIFIPGLGTIQIGVAGGPLFAGLIAS
HFGRIGPLKARFNSSGLNTINSLGLTLFLAGAGTSAGSDLVTVIAKHGIGIFASGAVITLVPLIISAWLVQRVFKLNLVH
GLGAICGGMTSTPGLGALNDITDSEEPSVAYAAVYPLALILVAISSQLLALLI

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=538, Percent_Identity=31.7843866171004, Blast_Score=254, Evalue=1e-68,
Organism=Escherichia coli, GI1787071, Length=548, Percent_Identity=29.3795620437956, Blast_Score=208, Evalue=7e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 56718; Mature: 56587

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFHETPVLTIFTIILLGLLLGSIQFKGLKLGASGVLLVALLMGHFGFEIPKVAQDLGL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH
ALFVLSVGLKAGPRFFRMLKRKGIAFSGIGLAIVISTGLITLMLSKLLNIPAPLGIGLMT
HHHHHHHCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
GALTSTPGLAAAIEATGDPMASVGYGIAYPFGVIAVVMFVQLVPKIKKDSFLEALQSAEA
HHHCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
DKERKQQRKNLISKAFRVENPELHKKTLAEIKLQKKAEVIISRIFRHDRSFVGRNDAVLL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
QGDHINVVGTSEELKKVDDYFGPSVEINDKTKEETDTEVENIIMNRDDLAGKTLQELNLR
ECCEEEEEECHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
HNPGVTITRVERSGIEFLPKPGKTLDKGDICTAVGTDKSLKELKDLFASKHLQVSDVDML
CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHH
PISVFLLSGILLGMIPIFIPGLGTIQIGVAGGPLFAGLIASHFGRIGPLKARFNSSGLNT
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHCCCCCCCHH
INSLGLTLFLAGAGTSAGSDLVTVIAKHGIGIFASGAVITLVPLIISAWLVQRVFKLNLV
HHHCCEEEEEEECCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
HGLGAICGGMTSTPGLGALNDITDSEEPSVAYAAVYPLALILVAISSQLLALLI
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SIFHETPVLTIFTIILLGLLLGSIQFKGLKLGASGVLLVALLMGHFGFEIPKVAQDLGL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHH
ALFVLSVGLKAGPRFFRMLKRKGIAFSGIGLAIVISTGLITLMLSKLLNIPAPLGIGLMT
HHHHHHHCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
GALTSTPGLAAAIEATGDPMASVGYGIAYPFGVIAVVMFVQLVPKIKKDSFLEALQSAEA
HHHCCCCCCCEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
DKERKQQRKNLISKAFRVENPELHKKTLAEIKLQKKAEVIISRIFRHDRSFVGRNDAVLL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
QGDHINVVGTSEELKKVDDYFGPSVEINDKTKEETDTEVENIIMNRDDLAGKTLQELNLR
ECCEEEEEECHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
HNPGVTITRVERSGIEFLPKPGKTLDKGDICTAVGTDKSLKELKDLFASKHLQVSDVDML
CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCHH
PISVFLLSGILLGMIPIFIPGLGTIQIGVAGGPLFAGLIASHFGRIGPLKARFNSSGLNT
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHCCCCCCCHH
INSLGLTLFLAGAGTSAGSDLVTVIAKHGIGIFASGAVITLVPLIISAWLVQRVFKLNLV
HHHCCEEEEEEECCCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
HGLGAICGGMTSTPGLGALNDITDSEEPSVAYAAVYPLALILVAISSQLLALLI
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA