Click here to switch to the map view.

The map label for this gene is cmo [H]

Identifier: 188585453

GI number: 188585453

Start: 861955

End: 863109

Strand: Reverse

Name: cmo [H]

Synonym: Nther_0825

Alternate gene names: 188585453

Gene position: 863109-861955 (Counterclockwise)

Preceding gene: 188585454

Following gene: 188585452

Centisome position: 27.27

GC content: 43.9

Gene sequence:

>1155_bases
ATGAGTAAAATAACTGGATACGAAAAAAATGATTCTCAATATAACTTTGATAATCCCGAAGATTGGATAAAGGTACAATA
CAGGGACGGAATTAAGTACCTACCCGTACAGTTGGACTTGAAAAAGCTATATTTAGAACTGACCACTAGATGTAATTTTG
ACTGCATCACCTGCATTAGAAACGCCTGGTTTAGAACCCCTGACAATATGAGCAACGATATATTGAATAAAATATTGGCT
GAACTCCCCGAGCTGGCCAAAAATGGGCTAAAAACAGTACACCTGGGTGGGTTTGGCGAGCCAATGGTGCATCCCCGCTT
CTTTGAAGTCGCGACTAAGGTTAAGGAGCTGGGACTTGAATTGGAGTTTATCACCAATGGCTACTACCTCACCCCTGAAC
GGGTAGATCAGTTGATAGGACTGCAAGCCGATAAGATTATTGTCTCCATGGACGCCCCCAGAGAAAAAGAGTACCAGCAG
ATCCGCAAAAACTCGGATTTTAATTTACTGCTGAAAAATCTAGAGCACATATACCACCAAAAAGTAAACTACCGAATTAA
CAAGCCCCATCTGTGGTTCGAATTCGTGGCCATGCAGTCAAATTACCATTTACTGCCGAACCTAGTGGAATTAGCAGGAA
AACTGCAGGTGGATTCAGTAATAGTCACCAATTTGCTCCCCTACACCGAAGACATGATTGATGAGGTTCTGTACGATGCC
GATGAGGACAATTTAGCAGTGGGAAGCGGTGCCGGGTTTATCTACTTCAGATCCCAACTTCCCGAAATGAAACTCCGCAC
CCACCGCTACTGTAATTTTGTGGAGTCTAAGTCCCTAGTAATCAATTACTTGGGCAAGGTTTCTCCGTGTTATCCAGGCA
TGCACAATCACACAGCTTATATTTACGGTAGGAAAAAATTCAATTACGCCTACCATGTCGGTGATCTGTCCCAACAGAGT
ATAGCGGAAATCTGGAAGCAAAGAGAATTTATTAAGTTCCGCTCCCAGGTCATGGAAGGGAGATTTCCCTCCTGCACTGA
TTGTAAGTATTTAGAAGGATGTTCCATGACCGACGACAATCAATTGGACTGCTGGGGAAACACCCCCACCTGTGCCGATT
GCCTCTGGTATCGTCAGATAATTCTGTGTCCGTAA

Upstream 100 bases:

>100_bases
AATGTAGACTTAGAGGAAACTGTGGAAGATGGCGACAGAATTGGTTTTTTCCCACCAATTGGCGGAGGTTAATTTTGCTT
AGAAATTAGGATGTGATATT

Downstream 100 bases:

>100_bases
CAATTCCACCCGAAAAGTATTCCTAAATAAAAAGGTATTTTTTACTAAATGTAAAATAGTATATAATACGGTCCATTAAA
TTTAGGAGGTTTAAACTATG

Product: Radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MSKITGYEKNDSQYNFDNPEDWIKVQYRDGIKYLPVQLDLKKLYLELTTRCNFDCITCIRNAWFRTPDNMSNDILNKILA
ELPELAKNGLKTVHLGGFGEPMVHPRFFEVATKVKELGLELEFITNGYYLTPERVDQLIGLQADKIIVSMDAPREKEYQQ
IRKNSDFNLLLKNLEHIYHQKVNYRINKPHLWFEFVAMQSNYHLLPNLVELAGKLQVDSVIVTNLLPYTEDMIDEVLYDA
DEDNLAVGSGAGFIYFRSQLPEMKLRTHRYCNFVESKSLVINYLGKVSPCYPGMHNHTAYIYGRKKFNYAYHVGDLSQQS
IAEIWKQREFIKFRSQVMEGRFPSCTDCKYLEGCSMTDDNQLDCWGNTPTCADCLWYRQIILCP

Sequences:

>Translated_384_residues
MSKITGYEKNDSQYNFDNPEDWIKVQYRDGIKYLPVQLDLKKLYLELTTRCNFDCITCIRNAWFRTPDNMSNDILNKILA
ELPELAKNGLKTVHLGGFGEPMVHPRFFEVATKVKELGLELEFITNGYYLTPERVDQLIGLQADKIIVSMDAPREKEYQQ
IRKNSDFNLLLKNLEHIYHQKVNYRINKPHLWFEFVAMQSNYHLLPNLVELAGKLQVDSVIVTNLLPYTEDMIDEVLYDA
DEDNLAVGSGAGFIYFRSQLPEMKLRTHRYCNFVESKSLVINYLGKVSPCYPGMHNHTAYIYGRKKFNYAYHVGDLSQQS
IAEIWKQREFIKFRSQVMEGRFPSCTDCKYLEGCSMTDDNQLDCWGNTPTCADCLWYRQIILCP
>Mature_383_residues
SKITGYEKNDSQYNFDNPEDWIKVQYRDGIKYLPVQLDLKKLYLELTTRCNFDCITCIRNAWFRTPDNMSNDILNKILAE
LPELAKNGLKTVHLGGFGEPMVHPRFFEVATKVKELGLELEFITNGYYLTPERVDQLIGLQADKIIVSMDAPREKEYQQI
RKNSDFNLLLKNLEHIYHQKVNYRINKPHLWFEFVAMQSNYHLLPNLVELAGKLQVDSVIVTNLLPYTEDMIDEVLYDAD
EDNLAVGSGAGFIYFRSQLPEMKLRTHRYCNFVESKSLVINYLGKVSPCYPGMHNHTAYIYGRKKFNYAYHVGDLSQQSI
AEIWKQREFIKFRSQVMEGRFPSCTDCKYLEGCSMTDDNQLDCWGNTPTCADCLWYRQIILCP

Specific function: Involved in the biosynthesis of a molybdopterin-based tungsten cofactor [H]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moaA/nifB/pqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44815; Mature: 44684

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKITGYEKNDSQYNFDNPEDWIKVQYRDGIKYLPVQLDLKKLYLELTTRCNFDCITCIR
CCCCCCCCCCCCCCCCCCCHHEEEEEEECCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHH
NAWFRTPDNMSNDILNKILAELPELAKNGLKTVHLGGFGEPMVHPRFFEVATKVKELGLE
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCE
LEFITNGYYLTPERVDQLIGLQADKIIVSMDAPREKEYQQIRKNSDFNLLLKNLEHIYHQ
EEEEECCEEECHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
KVNYRINKPHLWFEFVAMQSNYHLLPNLVELAGKLQVDSVIVTNLLPYTEDMIDEVLYDA
HHCEEECCCCEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCC
DEDNLAVGSGAGFIYFRSQLPEMKLRTHRYCNFVESKSLVINYLGKVSPCYPGMHNHTAY
CCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
IYGRKKFNYAYHVGDLSQQSIAEIWKQREFIKFRSQVMEGRFPSCTDCKYLEGCSMTDDN
EEEEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC
QLDCWGNTPTCADCLWYRQIILCP
CEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKITGYEKNDSQYNFDNPEDWIKVQYRDGIKYLPVQLDLKKLYLELTTRCNFDCITCIR
CCCCCCCCCCCCCCCCCCHHEEEEEEECCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHH
NAWFRTPDNMSNDILNKILAELPELAKNGLKTVHLGGFGEPMVHPRFFEVATKVKELGLE
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCE
LEFITNGYYLTPERVDQLIGLQADKIIVSMDAPREKEYQQIRKNSDFNLLLKNLEHIYHQ
EEEEECCEEECHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
KVNYRINKPHLWFEFVAMQSNYHLLPNLVELAGKLQVDSVIVTNLLPYTEDMIDEVLYDA
HHCEEECCCCEEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCC
DEDNLAVGSGAGFIYFRSQLPEMKLRTHRYCNFVESKSLVINYLGKVSPCYPGMHNHTAY
CCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
IYGRKKFNYAYHVGDLSQQSIAEIWKQREFIKFRSQVMEGRFPSCTDCKYLEGCSMTDDN
EEEEEEECEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC
QLDCWGNTPTCADCLWYRQIILCP
CEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7642512 [H]