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The map label for this gene is yobV [H]

Identifier: 188585444

GI number: 188585444

Start: 853351

End: 854289

Strand: Direct

Name: yobV [H]

Synonym: Nther_0815

Alternate gene names: 188585444

Gene position: 853351-854289 (Clockwise)

Preceding gene: 188585443

Following gene: 188585445

Centisome position: 26.96

GC content: 32.69

Gene sequence:

>939_bases
ATGAAACTTGATCGGTTGGTACGGGTGATGTCAGTAGCTGAAAAGATCAGGAAAGAACCTGGTATTACCTATAATGAATT
GGCCCAGGAATTTGATGTATCTGTGAGAACAGTTAGAAGAGATGTCAGTGTTTTAGAACAAGCTGGATTGCCAGTGCAAA
ATTATCATGGACTTAGATTTATGTCCGATGTTGAGCTGCCAAAAGTACAATTTGAACCTGATGAAGTCATACTTTTATTG
TTAATGGTAAATTTCATATCGAGATATGAAATAGATAATCAGATCCCTAATAGCTTATATGAAAAGTTAAAACAATATCT
TCCTGAAAAAATGATGGATAAATATCAGCATATTCAAAAGAGTGTATTAATCCACCCCCATGACAATGAACAAGATGGAA
GAAATATAGTCCGGAGATTTAAAGATATTATAGAATGTAAAAACCGTGTAAAAATTTATTATCAATCCCATTCATCAAAA
CAAGAAAACTGGCGAATGGTTGATCCTTATGGGGTGTTTTTCAAAAAACGGGCGTGGTATATGGTAGGGTACTGTCATAG
GCATTTAGATATTAGAATATTCAAATGTAATAGAATTAAAAAAATTAAATCATTACCAGATATGTATGATATTCCTAACG
ATTTTGATTTGGAAGAGTTTTTGTCAGATAGTTTTGAACTGATGAAAGGTGAACCCACCAAAATCAAGATAAAATTCACA
CAAGAAGTGGCATCATTAATTGAAGAGACGGTGTTCTATAAAAAAGAAAAGAAATTTAGAAATAATGGAGATATTATTTA
TGAGTTAGAAGTAGCTAACTGGCGGGAAGTATTTTCATGGGTACTATCTTTCGGTAGAAAGGCAGAAATCTTAGAACCTG
GATGGATGCGGGAAAAAATGATTAATGAACTTGAGTTAATGAAAGTTATGTATGACTAA

Upstream 100 bases:

>100_bases
CAAATGATCAGGTAGTAGAAAAGTAGTATCAGGAAGGGATTTACAAGTTAAATGAAGAACTAGTAAATTTAGTTGACGTA
AACAGGTAAGAGGTGGGGTT

Downstream 100 bases:

>100_bases
AAGTTGGTTAGATGGGGAGGGGGTGTTATTATGAAAACTATTATTGATCCTGATCCAAGAAACATTGATAGAGGATGGTT
AAAGCATTCCATTATTTTAT

Product: Helix-turn-helix type 11 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKLDRLVRVMSVAEKIRKEPGITYNELAQEFDVSVRTVRRDVSVLEQAGLPVQNYHGLRFMSDVELPKVQFEPDEVILLL
LMVNFISRYEIDNQIPNSLYEKLKQYLPEKMMDKYQHIQKSVLIHPHDNEQDGRNIVRRFKDIIECKNRVKIYYQSHSSK
QENWRMVDPYGVFFKKRAWYMVGYCHRHLDIRIFKCNRIKKIKSLPDMYDIPNDFDLEEFLSDSFELMKGEPTKIKIKFT
QEVASLIEETVFYKKEKKFRNNGDIIYELEVANWREVFSWVLSFGRKAEILEPGWMREKMINELELMKVMYD

Sequences:

>Translated_312_residues
MKLDRLVRVMSVAEKIRKEPGITYNELAQEFDVSVRTVRRDVSVLEQAGLPVQNYHGLRFMSDVELPKVQFEPDEVILLL
LMVNFISRYEIDNQIPNSLYEKLKQYLPEKMMDKYQHIQKSVLIHPHDNEQDGRNIVRRFKDIIECKNRVKIYYQSHSSK
QENWRMVDPYGVFFKKRAWYMVGYCHRHLDIRIFKCNRIKKIKSLPDMYDIPNDFDLEEFLSDSFELMKGEPTKIKIKFT
QEVASLIEETVFYKKEKKFRNNGDIIYELEVANWREVFSWVLSFGRKAEILEPGWMREKMINELELMKVMYD
>Mature_312_residues
MKLDRLVRVMSVAEKIRKEPGITYNELAQEFDVSVRTVRRDVSVLEQAGLPVQNYHGLRFMSDVELPKVQFEPDEVILLL
LMVNFISRYEIDNQIPNSLYEKLKQYLPEKMMDKYQHIQKSVLIHPHDNEQDGRNIVRRFKDIIECKNRVKIYYQSHSSK
QENWRMVDPYGVFFKKRAWYMVGYCHRHLDIRIFKCNRIKKIKSLPDMYDIPNDFDLEEFLSDSFELMKGEPTKIKIKFT
QEVASLIEETVFYKKEKKFRNNGDIIYELEVANWREVFSWVLSFGRKAEILEPGWMREKMINELELMKVMYD

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 37561; Mature: 37561

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDRLVRVMSVAEKIRKEPGITYNELAQEFDVSVRTVRRDVSVLEQAGLPVQNYHGLRF
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
MSDVELPKVQFEPDEVILLLLMVNFISRYEIDNQIPNSLYEKLKQYLPEKMMDKYQHIQK
ECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
SVLIHPHDNEQDGRNIVRRFKDIIECKNRVKIYYQSHSSKQENWRMVDPYGVFFKKRAWY
HEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEECHHHHHHHHHHHH
MVGYCHRHLDIRIFKCNRIKKIKSLPDMYDIPNDFDLEEFLSDSFELMKGEPTKIKIKFT
HHHHHHHCCEEEEEECHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEH
QEVASLIEETVFYKKEKKFRNNGDIIYELEVANWREVFSWVLSFGRKAEILEPGWMREKM
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
INELELMKVMYD
HHHHHHHHHHCC
>Mature Secondary Structure
MKLDRLVRVMSVAEKIRKEPGITYNELAQEFDVSVRTVRRDVSVLEQAGLPVQNYHGLRF
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
MSDVELPKVQFEPDEVILLLLMVNFISRYEIDNQIPNSLYEKLKQYLPEKMMDKYQHIQK
ECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
SVLIHPHDNEQDGRNIVRRFKDIIECKNRVKIYYQSHSSKQENWRMVDPYGVFFKKRAWY
HEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEECHHHHHHHHHHHH
MVGYCHRHLDIRIFKCNRIKKIKSLPDMYDIPNDFDLEEFLSDSFELMKGEPTKIKIKFT
HHHHHHHCCEEEEEECHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEH
QEVASLIEETVFYKKEKKFRNNGDIIYELEVANWREVFSWVLSFGRKAEILEPGWMREKM
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHH
INELELMKVMYD
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]