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The map label for this gene is hsdM [C]

Identifier: 188585425

GI number: 188585425

Start: 828200

End: 830221

Strand: Direct

Name: hsdM [C]

Synonym: Nther_0795

Alternate gene names: 188585425

Gene position: 828200-830221 (Clockwise)

Preceding gene: 188585424

Following gene: 188585426

Centisome position: 26.16

GC content: 34.47

Gene sequence:

>2022_bases
TTGAATATAGCAAGCTTTCAAGAAAAAGTTAATTTTATATGGAGTATAGCTGATTTACTCCGAGGAGATTATAAACGATC
AGACTACGGAAAAGTAATTTTACCTTTCACAGTTCTTAAGAGATTAGACTGTGCTTTGAAACCAACTAAAAATAAAGTTT
TAGAAGAATATAAAATGCTAAAAGACTCGGGGATTCAAAACCCTGAACCTGTACTTAATGATATTACGGGGCAACACTTT
CACAACACCAGCCAGTTTGATTTTGAAAAAATGAAAAATGAGCCTGATAATATAGGAGATAATCTCCGCCATTATATAAA
TGGTTTTTCTACAAATGCTCGTGACATTATTGAATATTTTAATTTTCATGATCACTTAGAAAGACTTGAGCAGTCAAATC
TTCTTTATTTAATTGTTTCACGTTTTTCGGAAATAGATCTTAGCCCTGAAAAAGTTTCTAACTTAGAAATGGGGTATATC
TTTGAAGAACTTATCAGGAAATTTTCTGAGCAGTCAAATGAAACTGCGGGGGAACACTTTACTCCTAGAGAAGTAATACG
GTTAATGGTCAATTTGTTATTCAACGAAGATTCGGACCTCTTACAAAAAGAAGGTTTGCTTCGAACAATTTATGACCCCG
CCTGTGGAACTGGTGGAATGCTATCTGTTGCCCGCGATTACCTAAGAGAATTGAACAATGATGCAAAGCTTGAAATGTTT
GGACAAGAGCTAAATCCGGAATCGTATGCGATTTGTAAAGCTGACATGATGATTAAAGGATTAGACCCGGATAATATAAA
GTTTGGTAATAGTTTTACTAATGACGGGTTTTCTGATAATACTTTTGATTATATGCTCTCTAATCCACCTTTCGGTGTAG
AGTGGAAAAAGATAGAGAAAGAAATAAAAGAAGAACATGAAAACCTTGGTTTTTCAGGAAGGTATGGTGCTGGATTACCG
AGGATTAATGACGGATCCATTTTATTTTTGCAGCATATGATTTCCAAGATGCAGCACCAAAATGGTGGCTCCAGGATTGC
AATTGTTTTAAATGGTTCACCTTTGTTTACTGGTGATGCAGGACAGGGAGAAAGTAACATAAGAAAATGGATTATAGAAA
ATGACCTATTAGAAGCAATTGTAGCTCTTCCAGAACAACTTTTCTATAACACAGGTATAAATACTTATGTATGGGTTTTA
ACTAACAGAAAAAGACCTTGGCGAAAAGGTAAAATACAACTAATCAATGCAGTAGAGTTTTATAAGAAGATGAGAAAAAG
CTTGGGTGAAAAAAGACATGAAATTTCTCCTGAACAAATAGACAAAATCAGTAAAATTTATGGAGAGTTTAAAGAAGGAG
AATACAGTAAGATTTTTGATAATGAAGATTTTGGATACTACAAAATTACAGTTGAGAGGCCTCTTAGACTTAATTTCCAG
GCCTCCGATGAACGAATTGAACGCTTGAAAGAACAGAGAGCATTTCAAAACCTCGCGAAATCAAAGAAAAAGGACCCAGC
AAAAAAAGAAGAAGAGATTAATGAAGGGGAAGAACAACAGGAAGCCATAATCAATGTCTTGAAAAGCATGGACGAGACTG
TCTATAAGAATAGGGAAGAATTCACTAAAATTTTAGATGAAGCTTTAAAAGATGCAGGAATAAAATTAAAAGCTTCTCTG
AAAAAAGCTGTTTTAAAAGCCCTTTCTGAACAAGATGAAACTGCAGAAATATGTACTGACTCTAAAGGCAACCCGGAACC
TGATCCAGATCTCAGGGATAATGAAATAGTGTCTTTAAAAGACGATATTAATGGCTATTTTGAAAGAGAAGTGAAGCCTC
ATGTTCCAGACGCTTGGATAGACGAATCAAAAACCAAAATAGGTTATGAAATACCATTTACAAGACATTTTTATAAGTAT
GAACCACCTAGAGAACCAGAGGTTATTATGGAAGAAATAATTGAATTGGAACATGACATCAAAGAAGAACTGAAGAAGGT
GATAGGCAATGGAGAAATTTAA

Upstream 100 bases:

>100_bases
GGTTTTTTGTTCTTGAAAAATAGAACCTTTATAACTCCAAGGTGGTTATAACGAAAAAAGGTGTTTGGTTATTAACTGAT
ATTAACGAGAGGTGATTTAT

Downstream 100 bases:

>100_bases
GCAATACAAAAAATACAAGGACTCTGGTATTGAATGGCTTGGAAAAGTTCCGAGTCACTGGGACATAAACCGGATGGATG
CTTATACAAAATATTACAAG

Product: N-6 DNA methylase

Products: NA

Alternate protein names: M.MjaXP [H]

Number of amino acids: Translated: 673; Mature: 673

Protein sequence:

>673_residues
MNIASFQEKVNFIWSIADLLRGDYKRSDYGKVILPFTVLKRLDCALKPTKNKVLEEYKMLKDSGIQNPEPVLNDITGQHF
HNTSQFDFEKMKNEPDNIGDNLRHYINGFSTNARDIIEYFNFHDHLERLEQSNLLYLIVSRFSEIDLSPEKVSNLEMGYI
FEELIRKFSEQSNETAGEHFTPREVIRLMVNLLFNEDSDLLQKEGLLRTIYDPACGTGGMLSVARDYLRELNNDAKLEMF
GQELNPESYAICKADMMIKGLDPDNIKFGNSFTNDGFSDNTFDYMLSNPPFGVEWKKIEKEIKEEHENLGFSGRYGAGLP
RINDGSILFLQHMISKMQHQNGGSRIAIVLNGSPLFTGDAGQGESNIRKWIIENDLLEAIVALPEQLFYNTGINTYVWVL
TNRKRPWRKGKIQLINAVEFYKKMRKSLGEKRHEISPEQIDKISKIYGEFKEGEYSKIFDNEDFGYYKITVERPLRLNFQ
ASDERIERLKEQRAFQNLAKSKKKDPAKKEEEINEGEEQQEAIINVLKSMDETVYKNREEFTKILDEALKDAGIKLKASL
KKAVLKALSEQDETAEICTDSKGNPEPDPDLRDNEIVSLKDDINGYFEREVKPHVPDAWIDESKTKIGYEIPFTRHFYKY
EPPREPEVIMEEIIELEHDIKEELKKVIGNGEI

Sequences:

>Translated_673_residues
MNIASFQEKVNFIWSIADLLRGDYKRSDYGKVILPFTVLKRLDCALKPTKNKVLEEYKMLKDSGIQNPEPVLNDITGQHF
HNTSQFDFEKMKNEPDNIGDNLRHYINGFSTNARDIIEYFNFHDHLERLEQSNLLYLIVSRFSEIDLSPEKVSNLEMGYI
FEELIRKFSEQSNETAGEHFTPREVIRLMVNLLFNEDSDLLQKEGLLRTIYDPACGTGGMLSVARDYLRELNNDAKLEMF
GQELNPESYAICKADMMIKGLDPDNIKFGNSFTNDGFSDNTFDYMLSNPPFGVEWKKIEKEIKEEHENLGFSGRYGAGLP
RINDGSILFLQHMISKMQHQNGGSRIAIVLNGSPLFTGDAGQGESNIRKWIIENDLLEAIVALPEQLFYNTGINTYVWVL
TNRKRPWRKGKIQLINAVEFYKKMRKSLGEKRHEISPEQIDKISKIYGEFKEGEYSKIFDNEDFGYYKITVERPLRLNFQ
ASDERIERLKEQRAFQNLAKSKKKDPAKKEEEINEGEEQQEAIINVLKSMDETVYKNREEFTKILDEALKDAGIKLKASL
KKAVLKALSEQDETAEICTDSKGNPEPDPDLRDNEIVSLKDDINGYFEREVKPHVPDAWIDESKTKIGYEIPFTRHFYKY
EPPREPEVIMEEIIELEHDIKEELKKVIGNGEI
>Mature_673_residues
MNIASFQEKVNFIWSIADLLRGDYKRSDYGKVILPFTVLKRLDCALKPTKNKVLEEYKMLKDSGIQNPEPVLNDITGQHF
HNTSQFDFEKMKNEPDNIGDNLRHYINGFSTNARDIIEYFNFHDHLERLEQSNLLYLIVSRFSEIDLSPEKVSNLEMGYI
FEELIRKFSEQSNETAGEHFTPREVIRLMVNLLFNEDSDLLQKEGLLRTIYDPACGTGGMLSVARDYLRELNNDAKLEMF
GQELNPESYAICKADMMIKGLDPDNIKFGNSFTNDGFSDNTFDYMLSNPPFGVEWKKIEKEIKEEHENLGFSGRYGAGLP
RINDGSILFLQHMISKMQHQNGGSRIAIVLNGSPLFTGDAGQGESNIRKWIIENDLLEAIVALPEQLFYNTGINTYVWVL
TNRKRPWRKGKIQLINAVEFYKKMRKSLGEKRHEISPEQIDKISKIYGEFKEGEYSKIFDNEDFGYYKITVERPLRLNFQ
ASDERIERLKEQRAFQNLAKSKKKDPAKKEEEINEGEEQQEAIINVLKSMDETVYKNREEFTKILDEALKDAGIKLKASL
KKAVLKALSEQDETAEICTDSKGNPEPDPDLRDNEIVSLKDDINGYFEREVKPHVPDAWIDESKTKIGYEIPFTRHFYKY
EPPREPEVIMEEIIELEHDIKEELKKVIGNGEI

Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1790808, Length=358, Percent_Identity=22.9050279329609, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022749
- InterPro:   IPR003356
- InterPro:   IPR002052
- InterPro:   IPR002296 [H]

Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 77951; Mature: 77951

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIASFQEKVNFIWSIADLLRGDYKRSDYGKVILPFTVLKRLDCALKPTKNKVLEEYKML
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHH
KDSGIQNPEPVLNDITGQHFHNTSQFDFEKMKNEPDNIGDNLRHYINGFSTNARDIIEYF
HHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
NFHDHLERLEQSNLLYLIVSRFSEIDLSPEKVSNLEMGYIFEELIRKFSEQSNETAGEHF
HHHHHHHHHHHCCEEEHEEHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
TPREVIRLMVNLLFNEDSDLLQKEGLLRTIYDPACGTGGMLSVARDYLRELNNDAKLEMF
CHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEHHH
GQELNPESYAICKADMMIKGLDPDNIKFGNSFTNDGFSDNTFDYMLSNPPFGVEWKKIEK
CCCCCCCCEEEEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHHH
EIKEEHENLGFSGRYGAGLPRINDGSILFLQHMISKMQHQNGGSRIAIVLNGSPLFTGDA
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCC
GQGESNIRKWIIENDLLEAIVALPEQLFYNTGINTYVWVLTNRKRPWRKGKIQLINAVEF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHH
YKKMRKSLGEKRHEISPEQIDKISKIYGEFKEGEYSKIFDNEDFGYYKITVERPLRLNFQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEEECCCEEECCC
ASDERIERLKEQRAFQNLAKSKKKDPAKKEEEINEGEEQQEAIINVLKSMDETVYKNREE
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
FTKILDEALKDAGIKLKASLKKAVLKALSEQDETAEICTDSKGNPEPDPDLRDNEIVSLK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEH
DDINGYFEREVKPHVPDAWIDESKTKIGYEIPFTRHFYKYEPPREPEVIMEEIIELEHDI
HHHCHHHHCCCCCCCCCHHHCCCCCCCCEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHH
KEELKKVIGNGEI
HHHHHHHHCCCCC
>Mature Secondary Structure
MNIASFQEKVNFIWSIADLLRGDYKRSDYGKVILPFTVLKRLDCALKPTKNKVLEEYKML
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHH
KDSGIQNPEPVLNDITGQHFHNTSQFDFEKMKNEPDNIGDNLRHYINGFSTNARDIIEYF
HHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
NFHDHLERLEQSNLLYLIVSRFSEIDLSPEKVSNLEMGYIFEELIRKFSEQSNETAGEHF
HHHHHHHHHHHCCEEEHEEHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
TPREVIRLMVNLLFNEDSDLLQKEGLLRTIYDPACGTGGMLSVARDYLRELNNDAKLEMF
CHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEHHH
GQELNPESYAICKADMMIKGLDPDNIKFGNSFTNDGFSDNTFDYMLSNPPFGVEWKKIEK
CCCCCCCCEEEEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCHHHHHHH
EIKEEHENLGFSGRYGAGLPRINDGSILFLQHMISKMQHQNGGSRIAIVLNGSPLFTGDA
HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCC
GQGESNIRKWIIENDLLEAIVALPEQLFYNTGINTYVWVLTNRKRPWRKGKIQLINAVEF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHH
YKKMRKSLGEKRHEISPEQIDKISKIYGEFKEGEYSKIFDNEDFGYYKITVERPLRLNFQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEEECCCEEECCC
ASDERIERLKEQRAFQNLAKSKKKDPAKKEEEINEGEEQQEAIINVLKSMDETVYKNREE
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH
FTKILDEALKDAGIKLKASLKKAVLKALSEQDETAEICTDSKGNPEPDPDLRDNEIVSLK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEH
DDINGYFEREVKPHVPDAWIDESKTKIGYEIPFTRHFYKYEPPREPEVIMEEIIELEHDI
HHHCHHHHCCCCCCCCCHHHCCCCCCCCEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHH
KEELKKVIGNGEI
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]