Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188585416

Identifier: 188585416

GI number: 188585416

Start: 818306

End: 818632

Strand: Reverse

Name: 188585416

Synonym: Nther_0786

Alternate gene names: NA

Gene position: 818632-818306 (Counterclockwise)

Preceding gene: 188585450

Following gene: 188585415

Centisome position: 25.86

GC content: 29.66

Gene sequence:

>327_bases
ATGAGAATTAAATACGACAAATTAATCAGAGATAACATACCTAAAATAATTCATAACAATGGTAGTAAAGCTGTAACATA
TAAACTATCCAACCCTGAAGAACTTAAAGCCAAATTACTTAACAAATTACAAGAAGAAATAGATGAATACATAGAATCAG
GAGAGCCAGAAGAACTAGCTGATATCATGGAAGTTATCAAAGCTATAACTGAAAATATTCATGAAATGAATTTTGAAGAA
ATAGAAAAAATTCGGGCCAAAAAAGAACAAGAACGCGGAGGTTTTGATCAAGGGATAGTCTTATCAGAAGTAAAAGAAAA
AAATTAG

Upstream 100 bases:

>100_bases
TAAACATATAAATTATAGATAACATATTTAATTATATATTTTGACAAAAATAACCAAAAAACCTCCATTTTTTAATAATG
CGCTTTGAGGTGATATAAAA

Downstream 100 bases:

>100_bases
ACCACTTTTCTCACCTTAACAACCATCTGTATAAAATTACCATTTGCGCTCAAAAATATAGTTTAGACACAACCATAAAG
TCTATTATGGGTCAAGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MRIKYDKLIRDNIPKIIHNNGSKAVTYKLSNPEELKAKLLNKLQEEIDEYIESGEPEELADIMEVIKAITENIHEMNFEE
IEKIRAKKEQERGGFDQGIVLSEVKEKN

Sequences:

>Translated_108_residues
MRIKYDKLIRDNIPKIIHNNGSKAVTYKLSNPEELKAKLLNKLQEEIDEYIESGEPEELADIMEVIKAITENIHEMNFEE
IEKIRAKKEQERGGFDQGIVLSEVKEKN
>Mature_108_residues
MRIKYDKLIRDNIPKIIHNNGSKAVTYKLSNPEELKAKLLNKLQEEIDEYIESGEPEELADIMEVIKAITENIHEMNFEE
IEKIRAKKEQERGGFDQGIVLSEVKEKN

Specific function: Unknown

COG id: COG4997

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12584; Mature: 12584

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKYDKLIRDNIPKIIHNNGSKAVTYKLSNPEELKAKLLNKLQEEIDEYIESGEPEELA
CCCCHHHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DIMEVIKAITENIHEMNFEEIEKIRAKKEQERGGFDQGIVLSEVKEKN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MRIKYDKLIRDNIPKIIHNNGSKAVTYKLSNPEELKAKLLNKLQEEIDEYIESGEPEELA
CCCCHHHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DIMEVIKAITENIHEMNFEEIEKIRAKKEQERGGFDQGIVLSEVKEKN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA