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The map label for this gene is yrkO [H]

Identifier: 188585379

GI number: 188585379

Start: 775139

End: 775753

Strand: Reverse

Name: yrkO [H]

Synonym: Nther_0746

Alternate gene names: 188585379

Gene position: 775753-775139 (Counterclockwise)

Preceding gene: 188585380

Following gene: 188585378

Centisome position: 24.51

GC content: 32.68

Gene sequence:

>615_bases
ATGAACAAAATATCAATGTCAGCACATACACCAATTTCTGAAAAAAATAGAATAAGCGAGATCGACATAATCAGGGGGGT
TGCATTATTTGGTGTTTTATTAGTAAACGTAGTTGCCTTTAATTTTACACTGCCAGCACATTTACAGGGCGTCACCCCTT
TAACCAACCCGCTTCACTTAGGATCAGCTATTGATCGTCTCTCAGCTGTTTTCATTCAGTTATTCGCAGAAGGTAAGTTT
TATACAATCTTTTCATTTTTATTTGGGTTAGGATTTTATATTTTTATTTCCAGGGCTGAAGAAAAGGGGCTGGATTCCAG
AAAACTATTTAAAAGAAGAATGTTAGCATTACTTGGTTTCGGAATACTACATTTAATTTTAGTATGGTACGGCGATATAC
TGCATGTTTATGCTTTGGGTGGATTCTTATTAGTCTTATTTAGAAATAAATCAGAAAGATCAAAGGTGAGGTACGCCACC
TTTGATGATTCTTTTTCTTTATGTGAATCATTGTCCAGTTGCCACAATATTTGTCTTGCTATTATGAAGTTAATGTTATA
TAATTGTAACAACACGTTAATTATTTTTAACATTTTGTTAGTTTTAAATAACTAA

Upstream 100 bases:

>100_bases
CTATAATAAAATATGACCGATCATATGACTCGGGTCACTAATCATATTACCTCCCCTCTTATTATAATTGACTTAACAAA
GCTTAGGGAGGTAATTTTTT

Downstream 100 bases:

>100_bases
ACGGGGGGTATTTAAAATAAAAACGAATAAACTGAAATACATGGGATTTTTAGGTCTGTTGGGTTTAATTGGGATGTTCA
CGGGTAATTACGGTTTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNKISMSAHTPISEKNRISEIDIIRGVALFGVLLVNVVAFNFTLPAHLQGVTPLTNPLHLGSAIDRLSAVFIQLFAEGKF
YTIFSFLFGLGFYIFISRAEEKGLDSRKLFKRRMLALLGFGILHLILVWYGDILHVYALGGFLLVLFRNKSERSKVRYAT
FDDSFSLCESLSSCHNICLAIMKLMLYNCNNTLIIFNILLVLNN

Sequences:

>Translated_204_residues
MNKISMSAHTPISEKNRISEIDIIRGVALFGVLLVNVVAFNFTLPAHLQGVTPLTNPLHLGSAIDRLSAVFIQLFAEGKF
YTIFSFLFGLGFYIFISRAEEKGLDSRKLFKRRMLALLGFGILHLILVWYGDILHVYALGGFLLVLFRNKSERSKVRYAT
FDDSFSLCESLSSCHNICLAIMKLMLYNCNNTLIIFNILLVLNN
>Mature_204_residues
MNKISMSAHTPISEKNRISEIDIIRGVALFGVLLVNVVAFNFTLPAHLQGVTPLTNPLHLGSAIDRLSAVFIQLFAEGKF
YTIFSFLFGLGFYIFISRAEEKGLDSRKLFKRRMLALLGFGILHLILVWYGDILHVYALGGFLLVLFRNKSERSKVRYAT
FDDSFSLCESLSSCHNICLAIMKLMLYNCNNTLIIFNILLVLNN

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788475, Length=146, Percent_Identity=32.1917808219178, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 23045; Mature: 23045

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKISMSAHTPISEKNRISEIDIIRGVALFGVLLVNVVAFNFTLPAHLQGVTPLTNPLHL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHH
GSAIDRLSAVFIQLFAEGKFYTIFSFLFGLGFYIFISRAEEKGLDSRKLFKRRMLALLGF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GILHLILVWYGDILHVYALGGFLLVLFRNKSERSKVRYATFDDSFSLCESLSSCHNICLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
IMKLMLYNCNNTLIIFNILLVLNN
HHHHHHHCCCCCEEEHHHHHHHCC
>Mature Secondary Structure
MNKISMSAHTPISEKNRISEIDIIRGVALFGVLLVNVVAFNFTLPAHLQGVTPLTNPLHL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHH
GSAIDRLSAVFIQLFAEGKFYTIFSFLFGLGFYIFISRAEEKGLDSRKLFKRRMLALLGF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GILHLILVWYGDILHVYALGGFLLVLFRNKSERSKVRYATFDDSFSLCESLSSCHNICLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
IMKLMLYNCNNTLIIFNILLVLNN
HHHHHHHCCCCCEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]