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The map label for this gene is ybbC [H]

Identifier: 188585302

GI number: 188585302

Start: 687609

End: 689198

Strand: Direct

Name: ybbC [H]

Synonym: Nther_0665

Alternate gene names: 188585302

Gene position: 687609-689198 (Clockwise)

Preceding gene: 188585301

Following gene: 188585303

Centisome position: 21.72

GC content: 38.43

Gene sequence:

>1590_bases
ATGAGCAGTTTAGCTAGCCTGAGAAGAGAAATATTACTACTATTTGTTTTAGCAGCAACTATTGCAATTATTAGTGCATC
TTTAGGAAACTTTACTAATACGACTTTTGCACGTGAAAAGGAGAATATGGTTGAACTGGGTAATGAAGTGCTTTTAGATG
ATTACCTTCACTTGGTAGAAGATAAACGAGTAGGGTTGATCACCAATCACACCGGTGTAAATAGCAATAAAGAAAGTCTA
GTTGATGTTTTCATGGATGATGATGGAATAAATTTAACTGCTGTATATGCACCAGAACATGGTTTGGACGGCGAAGCTAG
TGCTGGAGAATACGTAGAATCATATACTCATGAAGAACATGATATTCCCGTTTTCAGTTTATATGGACAGACTAGAGAAC
CTACCAGGGAAATGTTATCCAAAGTCGATGTATTACTGTTTGATATCCAGGATATAGGTGCCAGAAGTTATACATACATA
TCCACACTAAATTATTCCATGATGGCTTCTGAGAAATATGATGTCCCTGTAATTGTTTTGGATAGGCCAAATCCCCTTGG
GGGCATGACAGTAGAAGGTCCAGTCATGGAAGAAGAATTTATTTCTTTCGTTGGAGTGGACAAGTTACCTAAAGCCCATG
GGATGACTGTAGGGGAACTGGCTCAGTTCTTTAATCGTAAAATTGACGTGGACCTGACAGTTATTCCTATGAAAAATTAT
CAAAGAAATATGATCTTTCAAGATACCGGTTTACCTTGGGTTCAGACTTCGCCTAATATCCCGGATTTGGATTCTTGTTT
TGGATATATGGCTACAGGCTTAGGTGAGGGAACTGGTGTTTATCAAGCGGATAAATTCGAATGGATTGGTGGAAAAGATC
TCGATTCATATAAATTTGCAGAAGCTCTAAACCAGGCGGGACTTGAAGGGGTTTCTTTTATCCCAGAAGATAGGGGAAGT
GCCGGGGGAGTAAGACTTAATATTACTGATTACTATGCCTTTAATCCTGCTAAAACTGGAATTTACGCCTTATCCCAGGC
CTTTAAAATAGGAGACTTTGAAGTACCAACTAGTGACCAGGGAAATATTGTCATGTTCGACAAAATTATGGGTACGGACC
AAATAGGTATCGGCCTTAAAAAGGAGTTATCTCCACAGGAGATTGAAGAGAAGTATGCTCCTGAGTTACGCAACTTTAAA
GCAACTAGAAAACAGTATTTGCTGGATGAATACCAACCGGGAATCCTAGTTAAAGTAAATGAATCTATTATAAGTTTTGA
TGTCAAACCTTATATCGATGACAATAATCGTGTTTTAGTTCCTCTAAGAAATATATCTGAAGCTCTGGGAACCTTTGTTC
AATGGGAAGGAGATCATCAGGATGTGATAATAAATAAACCCGGCGGGAAACAGATACGATTTACTATTGGCAGCCAAATA
GCACAAGTAAATGGTAAAGATAAATCTATGGATACTGAACCATTGATCAAAGATGGGAGAACTATGATCCCTGCTCGATA
TATAGGTGAATTTTTGGAAGCACAGGTAGACTGGGACGGTCAATGGCAAAGAGTCACAATCAAATATTAA

Upstream 100 bases:

>100_bases
CCAGGATTTTACAGAATAAAAAACCTGCCATTAAAGGCAGGTTTTTGTATATTATGGTATAATTAACTAAAATAATACTA
GAAAGGGGATTACATATAGT

Downstream 100 bases:

>100_bases
CATACTCCCACAGCTAAAGAAGTGGGCTTTCTTCTGTTGTTAAAATCGTAAAGATAATCCTAAATATTTAAAGATTGATT
TTTTTCCCTTAGCTAAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSSLASLRREILLLFVLAATIAIISASLGNFTNTTFAREKENMVELGNEVLLDDYLHLVEDKRVGLITNHTGVNSNKESL
VDVFMDDDGINLTAVYAPEHGLDGEASAGEYVESYTHEEHDIPVFSLYGQTREPTREMLSKVDVLLFDIQDIGARSYTYI
STLNYSMMASEKYDVPVIVLDRPNPLGGMTVEGPVMEEEFISFVGVDKLPKAHGMTVGELAQFFNRKIDVDLTVIPMKNY
QRNMIFQDTGLPWVQTSPNIPDLDSCFGYMATGLGEGTGVYQADKFEWIGGKDLDSYKFAEALNQAGLEGVSFIPEDRGS
AGGVRLNITDYYAFNPAKTGIYALSQAFKIGDFEVPTSDQGNIVMFDKIMGTDQIGIGLKKELSPQEIEEKYAPELRNFK
ATRKQYLLDEYQPGILVKVNESIISFDVKPYIDDNNRVLVPLRNISEALGTFVQWEGDHQDVIINKPGGKQIRFTIGSQI
AQVNGKDKSMDTEPLIKDGRTMIPARYIGEFLEAQVDWDGQWQRVTIKY

Sequences:

>Translated_529_residues
MSSLASLRREILLLFVLAATIAIISASLGNFTNTTFAREKENMVELGNEVLLDDYLHLVEDKRVGLITNHTGVNSNKESL
VDVFMDDDGINLTAVYAPEHGLDGEASAGEYVESYTHEEHDIPVFSLYGQTREPTREMLSKVDVLLFDIQDIGARSYTYI
STLNYSMMASEKYDVPVIVLDRPNPLGGMTVEGPVMEEEFISFVGVDKLPKAHGMTVGELAQFFNRKIDVDLTVIPMKNY
QRNMIFQDTGLPWVQTSPNIPDLDSCFGYMATGLGEGTGVYQADKFEWIGGKDLDSYKFAEALNQAGLEGVSFIPEDRGS
AGGVRLNITDYYAFNPAKTGIYALSQAFKIGDFEVPTSDQGNIVMFDKIMGTDQIGIGLKKELSPQEIEEKYAPELRNFK
ATRKQYLLDEYQPGILVKVNESIISFDVKPYIDDNNRVLVPLRNISEALGTFVQWEGDHQDVIINKPGGKQIRFTIGSQI
AQVNGKDKSMDTEPLIKDGRTMIPARYIGEFLEAQVDWDGQWQRVTIKY
>Mature_528_residues
SSLASLRREILLLFVLAATIAIISASLGNFTNTTFAREKENMVELGNEVLLDDYLHLVEDKRVGLITNHTGVNSNKESLV
DVFMDDDGINLTAVYAPEHGLDGEASAGEYVESYTHEEHDIPVFSLYGQTREPTREMLSKVDVLLFDIQDIGARSYTYIS
TLNYSMMASEKYDVPVIVLDRPNPLGGMTVEGPVMEEEFISFVGVDKLPKAHGMTVGELAQFFNRKIDVDLTVIPMKNYQ
RNMIFQDTGLPWVQTSPNIPDLDSCFGYMATGLGEGTGVYQADKFEWIGGKDLDSYKFAEALNQAGLEGVSFIPEDRGSA
GGVRLNITDYYAFNPAKTGIYALSQAFKIGDFEVPTSDQGNIVMFDKIMGTDQIGIGLKKELSPQEIEEKYAPELRNFKA
TRKQYLLDEYQPGILVKVNESIISFDVKPYIDDNNRVLVPLRNISEALGTFVQWEGDHQDVIINKPGGKQIRFTIGSQIA
QVNGKDKSMDTEPLIKDGRTMIPARYIGEFLEAQVDWDGQWQRVTIKY

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 59133; Mature: 59001

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLASLRREILLLFVLAATIAIISASLGNFTNTTFAREKENMVELGNEVLLDDYLHLVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHC
DKRVGLITNHTGVNSNKESLVDVFMDDDGINLTAVYAPEHGLDGEASAGEYVESYTHEEH
CCCEEEEEECCCCCCCHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCC
DIPVFSLYGQTREPTREMLSKVDVLLFDIQDIGARSYTYISTLNYSMMASEKYDVPVIVL
CCCEEEECCCCCCHHHHHHHHHHEEEEEHHHCCCCCEEEEEECCEEEEECCCCCCEEEEE
DRPNPLGGMTVEGPVMEEEFISFVGVDKLPKAHGMTVGELAQFFNRKIDVDLTVIPMKNY
ECCCCCCCEEECCCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCCEEEEEECCCC
QRNMIFQDTGLPWVQTSPNIPDLDSCFGYMATGLGEGTGVYQADKFEWIGGKDLDSYKFA
CCCEEEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHH
EALNQAGLEGVSFIPEDRGSAGGVRLNITDYYAFNPAKTGIYALSQAFKIGDFEVPTSDQ
HHHHHCCCCCCEECCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCEECCCCCC
GNIVMFDKIMGTDQIGIGLKKELSPQEIEEKYAPELRNFKATRKQYLLDEYQPGILVKVN
CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEC
ESIISFDVKPYIDDNNRVLVPLRNISEALGTFVQWEGDHQDVIINKPGGKQIRFTIGSQI
CCEEEEECCEEECCCCEEEEEHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEECCCE
AQVNGKDKSMDTEPLIKDGRTMIPARYIGEFLEAQVDWDGQWQRVTIKY
EECCCCCCCCCCCHHHHCCCEECCHHHHHHHHHEECCCCCCEEEEEEEC
>Mature Secondary Structure 
SSLASLRREILLLFVLAATIAIISASLGNFTNTTFAREKENMVELGNEVLLDDYLHLVE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHC
DKRVGLITNHTGVNSNKESLVDVFMDDDGINLTAVYAPEHGLDGEASAGEYVESYTHEEH
CCCEEEEEECCCCCCCHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCC
DIPVFSLYGQTREPTREMLSKVDVLLFDIQDIGARSYTYISTLNYSMMASEKYDVPVIVL
CCCEEEECCCCCCHHHHHHHHHHEEEEEHHHCCCCCEEEEEECCEEEEECCCCCCEEEEE
DRPNPLGGMTVEGPVMEEEFISFVGVDKLPKAHGMTVGELAQFFNRKIDVDLTVIPMKNY
ECCCCCCCEEECCCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCCCCEEEEEECCCC
QRNMIFQDTGLPWVQTSPNIPDLDSCFGYMATGLGEGTGVYQADKFEWIGGKDLDSYKFA
CCCEEEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHH
EALNQAGLEGVSFIPEDRGSAGGVRLNITDYYAFNPAKTGIYALSQAFKIGDFEVPTSDQ
HHHHHCCCCCCEECCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCEECCCCCC
GNIVMFDKIMGTDQIGIGLKKELSPQEIEEKYAPELRNFKATRKQYLLDEYQPGILVKVN
CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEC
ESIISFDVKPYIDDNNRVLVPLRNISEALGTFVQWEGDHQDVIINKPGGKQIRFTIGSQI
CCEEEEECCEEECCCCEEEEEHHHHHHHHCCCEEECCCCCEEEEECCCCCEEEEEECCCE
AQVNGKDKSMDTEPLIKDGRTMIPARYIGEFLEAQVDWDGQWQRVTIKY
EECCCCCCCCCCCHHHHCCCEECCHHHHHHHHHEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]