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The map label for this gene is betI [C]

Identifier: 188585260

GI number: 188585260

Start: 647464

End: 648009

Strand: Direct

Name: betI [C]

Synonym: Nther_0622

Alternate gene names: 188585260

Gene position: 647464-648009 (Clockwise)

Preceding gene: 188585258

Following gene: 188585261

Centisome position: 20.45

GC content: 39.01

Gene sequence:

>546_bases
ATGAGTGACGATACCAAGAGCCGAATTTTTGAAGCAGCGGCCAAAATCATAAAAGAAAGAACTGTTGATGATATGACTTT
AGAAGAAGTAGCTAAAGAAGCGGGAATCAGCAAAGGCGGGTTGTTATACCATTTTCCCAGCAAAGAAGATTTAATTGAGG
GTTTAGTGGCTTATTATGAGCAATTATTTACTGGAGAGATAGAACAAGAGATGGGAAAAATGCCTGAAGGAGAGAAACGT
CCATTAACAGCTTATATAAATGCTGCTTTTAATTTTCAATCAAAAGCTTATGAAATTAGTCAGGGAGTATTAGCTGCCAG
CTTATTGAGCCCGGGTTTACTCGCCCCTGTGCAGAAGCGGCTGTCTGATTTTACCTCGCAGTATGATCAACATTTAAAGG
ATGAGGATATGGCTAATATTGTAAGATTAGCAGCAGATGGTCTATGGTTAGAGGATATCTTGGAGCTCAATACTGTTCCA
AAAGCCGAAAGAGATCGTATTAAAGAAAAACTTATTCAATTAGCTAAGGAGGTGGAGGAACGATGA

Upstream 100 bases:

>100_bases
AATAGCCTTAAAGGGATTAGGGATTTAACTTTATTTAAGAAGTCTGTTTAGTGTTTGTGTTTTGAACTTTGTTTTGACTC
GAATTAAAAGGGGTGGTTTT

Downstream 100 bases:

>100_bases
TGGAGTATATCATGTTAGCAGTTACAGCGTGGTTATTAGGTTTTATACCTTATTTTGAAATTTATCTGGCAGTTCCAGCT
ACAATAGCAATGGGTTTAGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator; Transcriptional Regulator Protein

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSDDTKSRIFEAAAKIIKERTVDDMTLEEVAKEAGISKGGLLYHFPSKEDLIEGLVAYYEQLFTGEIEQEMGKMPEGEKR
PLTAYINAAFNFQSKAYEISQGVLAASLLSPGLLAPVQKRLSDFTSQYDQHLKDEDMANIVRLAADGLWLEDILELNTVP
KAERDRIKEKLIQLAKEVEER

Sequences:

>Translated_181_residues
MSDDTKSRIFEAAAKIIKERTVDDMTLEEVAKEAGISKGGLLYHFPSKEDLIEGLVAYYEQLFTGEIEQEMGKMPEGEKR
PLTAYINAAFNFQSKAYEISQGVLAASLLSPGLLAPVQKRLSDFTSQYDQHLKDEDMANIVRLAADGLWLEDILELNTVP
KAERDRIKEKLIQLAKEVEER
>Mature_180_residues
SDDTKSRIFEAAAKIIKERTVDDMTLEEVAKEAGISKGGLLYHFPSKEDLIEGLVAYYEQLFTGEIEQEMGKMPEGEKRP
LTAYINAAFNFQSKAYEISQGVLAASLLSPGLLAPVQKRLSDFTSQYDQHLKDEDMANIVRLAADGLWLEDILELNTVPK
AERDRIKEKLIQLAKEVEER

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20410; Mature: 20279

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDTKSRIFEAAAKIIKERTVDDMTLEEVAKEAGISKGGLLYHFPSKEDLIEGLVAYYE
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHH
QLFTGEIEQEMGKMPEGEKRPLTAYINAAFNFQSKAYEISQGVLAASLLSPGLLAPVQKR
HHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LSDFTSQYDQHLKDEDMANIVRLAADGLWLEDILELNTVPKAERDRIKEKLIQLAKEVEE
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure 
SDDTKSRIFEAAAKIIKERTVDDMTLEEVAKEAGISKGGLLYHFPSKEDLIEGLVAYYE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHH
QLFTGEIEQEMGKMPEGEKRPLTAYINAAFNFQSKAYEISQGVLAASLLSPGLLAPVQKR
HHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LSDFTSQYDQHLKDEDMANIVRLAADGLWLEDILELNTVPKAERDRIKEKLIQLAKEVEE
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA