Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188585254

Identifier: 188585254

GI number: 188585254

Start: 641852

End: 642883

Strand: Direct

Name: 188585254

Synonym: Nther_0616

Alternate gene names: NA

Gene position: 641852-642883 (Clockwise)

Preceding gene: 188585253

Following gene: 188585255

Centisome position: 20.28

GC content: 35.27

Gene sequence:

>1032_bases
ATGTTATTTATTAGAAGAGGGCCTCTAATACTTTTTATGAAATGTGAAACCCCCGATGAGTTACGCGGGGTATTGAACGA
GATTGAAGAATCTGTCATCAAAATTGAGGGTGATATCAAAAGGGTAGTATGTACTGCTATGGATGAAGCAGGTGAAGCAG
ATACCATAGCAGCCTTTCAGCCAAAAGATACTGAAAATTTTTCACTATATAATGCCGAACAGGTCTTTTCTATTTCAGAT
ACTCCCACTAACTTCCTTGCTAAATTGATCAGTTGTGGAAAATCTCATTTAATTGATCAAGTAGAACCAGGACCTTCTTT
TATAGTTATGCGGGTTCCTACGCCAGGTAAAAAAGTGATTGATCAGCTAGCTGAGCATTACTCCGCTACAGCTGCTTATA
AAACAAGCTTTGATGATGCAGTTAAAACAGGAACTAGAAATTCAACAATTTTATTATTTTCGGATAAACCTATAAGTAGA
GTGTTATCACGCAGGGATATTTTACAGGAAGTATTATTTATTCCCCAAGTACCTTTGGAGATTTACAAAGATTTGAGAAC
TAATGCTATGCAGTTCTTTACTAGGGGATTAGAAGACGAAGAAAGCAATTGGTATGAATTGAAGATTAATATTTACGATA
GTAATGATCAATATTTTCTTCATCTGGATAGATTGTATACTGTTTTATCGGATCTGGAACTGGGTTTTGTCATAAATGAA
GAATGGACTAGGGACCAAGCTTTCATTATGATGTCAGTACCAGTATATCAAGTCAAATTATTCACTTTGACAGAACCCAA
AGAATTAAAGAAAATAATTATGGGTCTTGAATATGACGAAGAAGGTAATCGACTAGTTGATATGGATATTTACTTTAGGA
ACAGAAAGGTCGAGCGTAATAGCCTTCCTGAAGTAAGAAAAATGAGCAAGGAAAAGAGTGGTATCACATTCAGAAAAAAT
GTAATTGACATGATTTCCAAAGAAGCGGGTGATACTTTAAAAAGCCTGGAAGGAGAGATATCAGACTACTAA

Upstream 100 bases:

>100_bases
CTGTAAATAGATTTTCTTATCCCCGAGGCACTGATCACTATAGAAAATACAATAAATCAATGAGATTATTATAATTAATT
TTTGTTAGGGAGAGGATTAT

Downstream 100 bases:

>100_bases
TAAACTAATAAAGGGGTATCGATATGATAAATAATTGGTTAAATAAACTAGAAAGAAAATATCGACGTTTTGGGATTAAT
AATTTAATGGCATATATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLFIRRGPLILFMKCETPDELRGVLNEIEESVIKIEGDIKRVVCTAMDEAGEADTIAAFQPKDTENFSLYNAEQVFSISD
TPTNFLAKLISCGKSHLIDQVEPGPSFIVMRVPTPGKKVIDQLAEHYSATAAYKTSFDDAVKTGTRNSTILLFSDKPISR
VLSRRDILQEVLFIPQVPLEIYKDLRTNAMQFFTRGLEDEESNWYELKINIYDSNDQYFLHLDRLYTVLSDLELGFVINE
EWTRDQAFIMMSVPVYQVKLFTLTEPKELKKIIMGLEYDEEGNRLVDMDIYFRNRKVERNSLPEVRKMSKEKSGITFRKN
VIDMISKEAGDTLKSLEGEISDY

Sequences:

>Translated_343_residues
MLFIRRGPLILFMKCETPDELRGVLNEIEESVIKIEGDIKRVVCTAMDEAGEADTIAAFQPKDTENFSLYNAEQVFSISD
TPTNFLAKLISCGKSHLIDQVEPGPSFIVMRVPTPGKKVIDQLAEHYSATAAYKTSFDDAVKTGTRNSTILLFSDKPISR
VLSRRDILQEVLFIPQVPLEIYKDLRTNAMQFFTRGLEDEESNWYELKINIYDSNDQYFLHLDRLYTVLSDLELGFVINE
EWTRDQAFIMMSVPVYQVKLFTLTEPKELKKIIMGLEYDEEGNRLVDMDIYFRNRKVERNSLPEVRKMSKEKSGITFRKN
VIDMISKEAGDTLKSLEGEISDY
>Mature_343_residues
MLFIRRGPLILFMKCETPDELRGVLNEIEESVIKIEGDIKRVVCTAMDEAGEADTIAAFQPKDTENFSLYNAEQVFSISD
TPTNFLAKLISCGKSHLIDQVEPGPSFIVMRVPTPGKKVIDQLAEHYSATAAYKTSFDDAVKTGTRNSTILLFSDKPISR
VLSRRDILQEVLFIPQVPLEIYKDLRTNAMQFFTRGLEDEESNWYELKINIYDSNDQYFLHLDRLYTVLSDLELGFVINE
EWTRDQAFIMMSVPVYQVKLFTLTEPKELKKIIMGLEYDEEGNRLVDMDIYFRNRKVERNSLPEVRKMSKEKSGITFRKN
VIDMISKEAGDTLKSLEGEISDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39484; Mature: 39484

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIRRGPLILFMKCETPDELRGVLNEIEESVIKIEGDIKRVVCTAMDEAGEADTIAAFQ
CEEEECCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCEEEEEC
PKDTENFSLYNAEQVFSISDTPTNFLAKLISCGKSHLIDQVEPGPSFIVMRVPTPGKKVI
CCCCCCCEEECHHHEEEECCCCHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCCCCHHHH
DQLAEHYSATAAYKTSFDDAVKTGTRNSTILLFSDKPISRVLSRRDILQEVLFIPQVPLE
HHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHH
IYKDLRTNAMQFFTRGLEDEESNWYELKINIYDSNDQYFLHLDRLYTVLSDLELGFVINE
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCEEEEECC
EWTRDQAFIMMSVPVYQVKLFTLTEPKELKKIIMGLEYDEEGNRLVDMDIYFRNRKVERN
CCCCCCEEEEEECCEEEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCC
SLPEVRKMSKEKSGITFRKNVIDMISKEAGDTLKSLEGEISDY
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCC
>Mature Secondary Structure
MLFIRRGPLILFMKCETPDELRGVLNEIEESVIKIEGDIKRVVCTAMDEAGEADTIAAFQ
CEEEECCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCEEEEEC
PKDTENFSLYNAEQVFSISDTPTNFLAKLISCGKSHLIDQVEPGPSFIVMRVPTPGKKVI
CCCCCCCEEECHHHEEEECCCCHHHHHHHHHCCHHHHHCCCCCCCCEEEEECCCCCHHHH
DQLAEHYSATAAYKTSFDDAVKTGTRNSTILLFSDKPISRVLSRRDILQEVLFIPQVPLE
HHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHH
IYKDLRTNAMQFFTRGLEDEESNWYELKINIYDSNDQYFLHLDRLYTVLSDLELGFVINE
HHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCEEEEECC
EWTRDQAFIMMSVPVYQVKLFTLTEPKELKKIIMGLEYDEEGNRLVDMDIYFRNRKVERN
CCCCCCEEEEEECCEEEEEEEEECCHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCC
SLPEVRKMSKEKSGITFRKNVIDMISKEAGDTLKSLEGEISDY
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA