Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

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The map label for this gene is 188585168

Identifier: 188585168

GI number: 188585168

Start: 551567

End: 551914

Strand: Direct

Name: 188585168

Synonym: Nther_0529

Alternate gene names: NA

Gene position: 551567-551914 (Clockwise)

Preceding gene: 188585167

Following gene: 188585169

Centisome position: 17.42

GC content: 37.64

Gene sequence:

>348_bases
ATGATACAGGTTGAAGTATATCGCAAAAAAGGTAAAATTTGTGGTTTTAAGGTTGAAGGACACGCAGATTATGCCCGGGA
AGGTGAGGATATAGTTTGTGCAGCCATATCAGCACTTAGTCTGACAGGAGTTTTTGCCAGTGAAAAACTGTGTAATCTGA
GCAAACAGATAACTCAACCTGAAGAGGGTCTATTGTCTTTAGAAATGCCTACCGGGTTAGATGAACAACAACAACAAACC
TACGAAATTATTCTTGAGACTGTGATTATAGGTATTTATGAAACAGCTAAAAATTATCCGGATTACATTAATATAGAGGA
TGAAGGGGGGGAATACTCATGGAATTAA

Upstream 100 bases:

>100_bases
GTACAAACCTAAGAAAAACTATCGTAGAAAACAAGGACATCGTCAGCCATTCAGCAAGGTTAAAATTGACAAAATTAAAC
TTAACGGTTAATTTAATGCT

Downstream 100 bases:

>100_bases
AAATGAATCTACAGCTGTTTGCCCAGAAAAAAGGTACAGGCAGTTCCAAAAACGGTAGAGACAGTATTAGTAAACGTTTA
GGAGTTAAAAGGCACGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQPEEGLLSLEMPTGLDEQQQQT
YEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN

Sequences:

>Translated_115_residues
MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQPEEGLLSLEMPTGLDEQQQQT
YEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN
>Mature_115_residues
MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQPEEGLLSLEMPTGLDEQQQQT
YEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12885; Mature: 12885

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQP
CEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
EEGLLSLEMPTGLDEQQQQTYEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQP
CEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
EEGLLSLEMPTGLDEQQQQTYEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA