| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188585168
Identifier: 188585168
GI number: 188585168
Start: 551567
End: 551914
Strand: Direct
Name: 188585168
Synonym: Nther_0529
Alternate gene names: NA
Gene position: 551567-551914 (Clockwise)
Preceding gene: 188585167
Following gene: 188585169
Centisome position: 17.42
GC content: 37.64
Gene sequence:
>348_bases ATGATACAGGTTGAAGTATATCGCAAAAAAGGTAAAATTTGTGGTTTTAAGGTTGAAGGACACGCAGATTATGCCCGGGA AGGTGAGGATATAGTTTGTGCAGCCATATCAGCACTTAGTCTGACAGGAGTTTTTGCCAGTGAAAAACTGTGTAATCTGA GCAAACAGATAACTCAACCTGAAGAGGGTCTATTGTCTTTAGAAATGCCTACCGGGTTAGATGAACAACAACAACAAACC TACGAAATTATTCTTGAGACTGTGATTATAGGTATTTATGAAACAGCTAAAAATTATCCGGATTACATTAATATAGAGGA TGAAGGGGGGGAATACTCATGGAATTAA
Upstream 100 bases:
>100_bases GTACAAACCTAAGAAAAACTATCGTAGAAAACAAGGACATCGTCAGCCATTCAGCAAGGTTAAAATTGACAAAATTAAAC TTAACGGTTAATTTAATGCT
Downstream 100 bases:
>100_bases AAATGAATCTACAGCTGTTTGCCCAGAAAAAAGGTACAGGCAGTTCCAAAAACGGTAGAGACAGTATTAGTAAACGTTTA GGAGTTAAAAGGCACGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQPEEGLLSLEMPTGLDEQQQQT YEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN
Sequences:
>Translated_115_residues MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQPEEGLLSLEMPTGLDEQQQQT YEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN >Mature_115_residues MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQPEEGLLSLEMPTGLDEQQQQT YEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN
Specific function: Unknown
COG id: COG2868
COG function: function code J; Predicted ribosomal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12885; Mature: 12885
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQP CEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC EEGLLSLEMPTGLDEQQQQTYEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MIQVEVYRKKGKICGFKVEGHADYAREGEDIVCAAISALSLTGVFASEKLCNLSKQITQP CEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC EEGLLSLEMPTGLDEQQQQTYEIILETVIIGIYETAKNYPDYINIEDEGGEYSWN CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA