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The map label for this gene is 188585078

Identifier: 188585078

GI number: 188585078

Start: 460880

End: 462157

Strand: Direct

Name: 188585078

Synonym: Nther_0439

Alternate gene names: NA

Gene position: 460880-462157 (Clockwise)

Preceding gene: 188585077

Following gene: 188585079

Centisome position: 14.56

GC content: 35.68

Gene sequence:

>1278_bases
GTGGAAGAATTTAAGGTAAGATTTATAAAAAAACAAGTGTTTTTTATTCCTGTACCAGTGTTGATTTTAGCATTTATATC
TGGTGTATCGGTTTATTGGATTTTATTTTGGTTTATAGTATTATGGTTGGGGGGTTCCCTAGCTTGGCTCTTATATACTG
CTTGGAATTTGGAACTAGATATAGAATTGAAGGATCAGGTCATGATCAGGAAAGAGTCTACCAGTATTAAAATAAGGCTC
TTTAACGAATCTTTTCTACCTTTTCCCTATGGTGAATTATTAACAAATAACTGGAGTTATCGTGATATGTCGGGCGCAAA
CCAAAAGCTATTTGATCAAGATCAGAAACAAGATGATAATCATACCAGAATATTTCAATTTTTCTTCAATGATAGGCAAG
TTGATAGTTGGGTTGAAGTTACTGATATTAATCCACTAGGGGGGTGGCAACGTGTATTTGATGTGAAGTGTTATACTAGA
GGAAAGTTTTATATAGGACCTATGAAAATTAGAATTTTTTCTCCTTTTAGTGTCTTTTTGGTGGAGAAAAAGTTTGATGA
AAAAGAATTAGTTACCGTACAACCCCGCTTGTTGTCTTTTATAGGTCAATTCGATGCTAGCGGTAGTGATCCCCAGGGAA
TTACTAGGAAAAAAAATACTTTTTTTCAGCCCATGGATTACATGGAAGTCCATGACTTACGACCCTTTGTATCAGGAGAT
CCACTCAAATTAATTAACTGGAAAGTTTCGGCCCGGCAAGGGGAGTTGTATGTAAAAAGGATTGAAAATACTGGTGATGA
GCGGTTATTATTATGCGTTGAATTTTCAAAAAAGTATTACTATTCGCGGGAACAACAGGATCTGTTATTGGAAAAAGCCT
TATCAGTAGTGAAATATTTTTCTGATAACAACATTCAACTGGGGATTCTAACTATTGATGATAATTTAAGATATTTACCG
CCCTCTTCAGGCAGAAATCAGTGGCAATTGGCCCGAAAATTGTTTACCGATTTAAAAAGAAATACCAGCGAAAACCTGCC
TAGCTACTTCCAGAGGACTTCTCAAACTATGAAAGGTAACAAGATCTTGTGGTTGACCCCTTATTTAGATAGGCATTATA
AGCAGGGATTAAAAACACTGGCTTCCGGTGGGACACAGATAACTTTGCTAATAGACCAGAAAGGCAAAAATATTGATATA
AAAGATTTAACAATTCCTGCTTATCAATTGAACTATTACAGGGGTCAAGTTGCAATTAAGGAGGTGTTCACCTCTTGA

Upstream 100 bases:

>100_bases
AAGCAGCCCTGTTGGAAAGATTAGAAAACGAGGAGGTTATACAAGATATAATTAATAAAGTTAGGGTGCCTGGTAATACC
GGAAGGTTTAGGTGATTTAA

Downstream 100 bases:

>100_bases
CCAAGAGCGGTGAAGGCGGTGGATACTTAGAGTTTATCTTATTACTAATTACTAATTGCTTTTTGGTTTCATCCTTTGTT
GACTTTTTTGGATATTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MEEFKVRFIKKQVFFIPVPVLILAFISGVSVYWILFWFIVLWLGGSLAWLLYTAWNLELDIELKDQVMIRKESTSIKIRL
FNESFLPFPYGELLTNNWSYRDMSGANQKLFDQDQKQDDNHTRIFQFFFNDRQVDSWVEVTDINPLGGWQRVFDVKCYTR
GKFYIGPMKIRIFSPFSVFLVEKKFDEKELVTVQPRLLSFIGQFDASGSDPQGITRKKNTFFQPMDYMEVHDLRPFVSGD
PLKLINWKVSARQGELYVKRIENTGDERLLLCVEFSKKYYYSREQQDLLLEKALSVVKYFSDNNIQLGILTIDDNLRYLP
PSSGRNQWQLARKLFTDLKRNTSENLPSYFQRTSQTMKGNKILWLTPYLDRHYKQGLKTLASGGTQITLLIDQKGKNIDI
KDLTIPAYQLNYYRGQVAIKEVFTS

Sequences:

>Translated_425_residues
MEEFKVRFIKKQVFFIPVPVLILAFISGVSVYWILFWFIVLWLGGSLAWLLYTAWNLELDIELKDQVMIRKESTSIKIRL
FNESFLPFPYGELLTNNWSYRDMSGANQKLFDQDQKQDDNHTRIFQFFFNDRQVDSWVEVTDINPLGGWQRVFDVKCYTR
GKFYIGPMKIRIFSPFSVFLVEKKFDEKELVTVQPRLLSFIGQFDASGSDPQGITRKKNTFFQPMDYMEVHDLRPFVSGD
PLKLINWKVSARQGELYVKRIENTGDERLLLCVEFSKKYYYSREQQDLLLEKALSVVKYFSDNNIQLGILTIDDNLRYLP
PSSGRNQWQLARKLFTDLKRNTSENLPSYFQRTSQTMKGNKILWLTPYLDRHYKQGLKTLASGGTQITLLIDQKGKNIDI
KDLTIPAYQLNYYRGQVAIKEVFTS
>Mature_425_residues
MEEFKVRFIKKQVFFIPVPVLILAFISGVSVYWILFWFIVLWLGGSLAWLLYTAWNLELDIELKDQVMIRKESTSIKIRL
FNESFLPFPYGELLTNNWSYRDMSGANQKLFDQDQKQDDNHTRIFQFFFNDRQVDSWVEVTDINPLGGWQRVFDVKCYTR
GKFYIGPMKIRIFSPFSVFLVEKKFDEKELVTVQPRLLSFIGQFDASGSDPQGITRKKNTFFQPMDYMEVHDLRPFVSGD
PLKLINWKVSARQGELYVKRIENTGDERLLLCVEFSKKYYYSREQQDLLLEKALSVVKYFSDNNIQLGILTIDDNLRYLP
PSSGRNQWQLARKLFTDLKRNTSENLPSYFQRTSQTMKGNKILWLTPYLDRHYKQGLKTLASGGTQITLLIDQKGKNIDI
KDLTIPAYQLNYYRGQVAIKEVFTS

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50014; Mature: 50014

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEFKVRFIKKQVFFIPVPVLILAFISGVSVYWILFWFIVLWLGGSLAWLLYTAWNLELD
CCCHHEEHEEHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEEEEE
IELKDQVMIRKESTSIKIRLFNESFLPFPYGELLTNNWSYRDMSGANQKLFDQDQKQDDN
EEECCEEEEEECCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCC
HTRIFQFFFNDRQVDSWVEVTDINPLGGWQRVFDVKCYTRGKFYIGPMKIRIFSPFSVFL
CEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCEEEECCEEEEEECCEEEEE
VEKKFDEKELVTVQPRLLSFIGQFDASGSDPQGITRKKNTFFQPMDYMEVHDLRPFVSGD
EECCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
PLKLINWKVSARQGELYVKRIENTGDERLLLCVEFSKKYYYSREQQDLLLEKALSVVKYF
CEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHH
SDNNIQLGILTIDDNLRYLPPSSGRNQWQLARKLFTDLKRNTSENLPSYFQRTSQTMKGN
CCCCEEEEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
KILWLTPYLDRHYKQGLKTLASGGTQITLLIDQKGKNIDIKDLTIPAYQLNYYRGQVAIK
EEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECEEEEEEEECCEEHH
EVFTS
HHHCC
>Mature Secondary Structure
MEEFKVRFIKKQVFFIPVPVLILAFISGVSVYWILFWFIVLWLGGSLAWLLYTAWNLELD
CCCHHEEHEEHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEEEEE
IELKDQVMIRKESTSIKIRLFNESFLPFPYGELLTNNWSYRDMSGANQKLFDQDQKQDDN
EEECCEEEEEECCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCC
HTRIFQFFFNDRQVDSWVEVTDINPLGGWQRVFDVKCYTRGKFYIGPMKIRIFSPFSVFL
CEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEEEECCEEEECCEEEEEECCEEEEE
VEKKFDEKELVTVQPRLLSFIGQFDASGSDPQGITRKKNTFFQPMDYMEVHDLRPFVSGD
EECCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
PLKLINWKVSARQGELYVKRIENTGDERLLLCVEFSKKYYYSREQQDLLLEKALSVVKYF
CEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHH
SDNNIQLGILTIDDNLRYLPPSSGRNQWQLARKLFTDLKRNTSENLPSYFQRTSQTMKGN
CCCCEEEEEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
KILWLTPYLDRHYKQGLKTLASGGTQITLLIDQKGKNIDIKDLTIPAYQLNYYRGQVAIK
EEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECEEEEEEEECCEEHH
EVFTS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA