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The map label for this gene is ylxY [H]

Identifier: 188584991

GI number: 188584991

Start: 364329

End: 364859

Strand: Reverse

Name: ylxY [H]

Synonym: Nther_0351

Alternate gene names: 188584991

Gene position: 364859-364329 (Counterclockwise)

Preceding gene: 188584992

Following gene: 188584988

Centisome position: 11.53

GC content: 38.23

Gene sequence:

>531_bases
ATGGGAAAAGAAATTGTAGAAAGGGGCCACGAATTAGAAAATCACAGCTTAACTCATCCTCATATGACTAACCTGGAAAA
GGAACAGATAGAACACGAAGTGGAAAGGGTTCATCATCAAATAGTAGATCTCACAGGTCATGAGCCAGAACTGTTCAGGG
CACCTTTTGGCGATTACAATAATCTTTTAATTGATACACTAGAAGAAATGAACTATTATCCTATTCAATGGAGTCTTGAT
TCGATGGATTGGCAGGCACCAGATGCCGATTATATCGAAAAGAAAGTTATGGATGATGTGGGAGCCGGAGATATAATCCT
ATTCCACAATAATGCTACTTACACACCCGAAGCCCTGGACACAATCTTGGAACAGTTAATCGGGGAAGGCGAAGAAGAAG
GATATGAAATAGTTCCAATTTCGGAGTTGATTTATAAGGATAATTATGAGATTGATACCAATACGGGAGTTCAAAAGCAT
GAATCAACTTCTATTGATCTAGAAAACAGTGACTTGGATGAAAATGATTAA

Upstream 100 bases:

>100_bases
GGGTGCAGAAAGAACACATGACATACTGGACATTTTAGATGATTATAATATCACTACAACTTTCTTTGTAACAGGATTCT
GGTTAGAGAATTACCCCGAG

Downstream 100 bases:

>100_bases
CACCGCCTAAAATGGCGGTGTTTTTCTTGATCCTTTTTTAATATAGTTATAATGTTAGTAAATATTTGTAGTTAGAGTTT
ATAGTATATATCTTATTAAT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MGKEIVERGHELENHSLTHPHMTNLEKEQIEHEVERVHHQIVDLTGHEPELFRAPFGDYNNLLIDTLEEMNYYPIQWSLD
SMDWQAPDADYIEKKVMDDVGAGDIILFHNNATYTPEALDTILEQLIGEGEEEGYEIVPISELIYKDNYEIDTNTGVQKH
ESTSIDLENSDLDEND

Sequences:

>Translated_176_residues
MGKEIVERGHELENHSLTHPHMTNLEKEQIEHEVERVHHQIVDLTGHEPELFRAPFGDYNNLLIDTLEEMNYYPIQWSLD
SMDWQAPDADYIEKKVMDDVGAGDIILFHNNATYTPEALDTILEQLIGEGEEEGYEIVPISELIYKDNYEIDTNTGVQKH
ESTSIDLENSDLDEND
>Mature_175_residues
GKEIVERGHELENHSLTHPHMTNLEKEQIEHEVERVHHQIVDLTGHEPELFRAPFGDYNNLLIDTLEEMNYYPIQWSLDS
MDWQAPDADYIEKKVMDDVGAGDIILFHNNATYTPEALDTILEQLIGEGEEEGYEIVPISELIYKDNYEIDTNTGVQKHE
STSIDLENSDLDEND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 20338; Mature: 20207

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKEIVERGHELENHSLTHPHMTNLEKEQIEHEVERVHHQIVDLTGHEPELFRAPFGDYN
CCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCH
NLLIDTLEEMNYYPIQWSLDSMDWQAPDADYIEKKVMDDVGAGDIILFHNNATYTPEALD
HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
TILEQLIGEGEEEGYEIVPISELIYKDNYEIDTNTGVQKHESTSIDLENSDLDEND
HHHHHHHCCCCCCCEEEEEHHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
GKEIVERGHELENHSLTHPHMTNLEKEQIEHEVERVHHQIVDLTGHEPELFRAPFGDYN
CHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCCH
NLLIDTLEEMNYYPIQWSLDSMDWQAPDADYIEKKVMDDVGAGDIILFHNNATYTPEALD
HHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH
TILEQLIGEGEEEGYEIVPISELIYKDNYEIDTNTGVQKHESTSIDLENSDLDEND
HHHHHHHCCCCCCCEEEEEHHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]