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The map label for this gene is dnaJ [H]

Identifier: 188584985

GI number: 188584985

Start: 358066

End: 358842

Strand: Reverse

Name: dnaJ [H]

Synonym: Nther_0345

Alternate gene names: 188584985

Gene position: 358842-358066 (Counterclockwise)

Preceding gene: 188584987

Following gene: 188584980

Centisome position: 11.34

GC content: 28.7

Gene sequence:

>777_bases
ATGAACATATTAAAACAAGGTATCGGTAAACTTATATATGTAACTTCTCTAACAATATATAAGTTTTTTGATTTGATTAT
AATTTTTTTAGAAGCAAGTGTATCACTTGTCAAAAGTATTATGAGCTTATTTTTTGGTTTAGTGATGGTTGGAGGCTGTT
TTCTATTACTTATATTAATAGGTCCAGTCACCTTAACTCTATTAACAAACCCACGACTACTAATAACGGTGATATTTCTA
CTCATATATCCGTTATTAGGAACTATCCTTACAGCTTATAGTAAATATTTAAAGTATATGATTACCGAATATTTATTTGA
CTATGCTAATTTTCTTATAGATGGTAAAGAACGACGATTTAATTCATTTTTAAAATACGGTGAAGAGTATAAAAGATTTG
AATATGAAAGAAAAGAAAGAGAACGAAGAGAAAGACAGTACCAACAACAAAAACAGTGGGAAGAAACATTTAGAAGATGG
CAACAACAATCAGGTTATGGACAAGGCCACTATGGTCAATACAATTGGCACGGTAATCATAATACCCATACGAATCCAAA
TGTTAATTTAAAACAAAAGTATGAAGAAAGTTGTGACATACTAAATGTAGATTACAATGCAGATAAAGATGAAATAAGAA
AAGCATTTAGGAAGATGGCTAAAAAATATCACCCAGATATCAATGACTCTCCTGAAGCAACAAAAACTTTTAAAAAAATA
AATAATGCTTATGAGTTCTTAAGTGATAATATAGAAAGATATAAAAACATTCAGTAG

Upstream 100 bases:

>100_bases
ATAAGTGATACAATAACTGTCAGTTAGTAGATATTTATAATTCAGTGTAGAAATAGAGTAGCACTCCATTTCTGCCATAT
AAAGAGGTGCTTTAATTTAA

Downstream 100 bases:

>100_bases
AAAAGGCAACACAACCGATCATGAAAACAGTGACTTTAATGAAAATGATTAACACCGCCGAAAAAGGCGGTGTTTTCTTC
GAATACCTTCATAAAGTGCA

Product: heat shock protein DnaJ domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNILKQGIGKLIYVTSLTIYKFFDLIIIFLEASVSLVKSIMSLFFGLVMVGGCFLLLILIGPVTLTLLTNPRLLITVIFL
LIYPLLGTILTAYSKYLKYMITEYLFDYANFLIDGKERRFNSFLKYGEEYKRFEYERKERERRERQYQQQKQWEETFRRW
QQQSGYGQGHYGQYNWHGNHNTHTNPNVNLKQKYEESCDILNVDYNADKDEIRKAFRKMAKKYHPDINDSPEATKTFKKI
NNAYEFLSDNIERYKNIQ

Sequences:

>Translated_258_residues
MNILKQGIGKLIYVTSLTIYKFFDLIIIFLEASVSLVKSIMSLFFGLVMVGGCFLLLILIGPVTLTLLTNPRLLITVIFL
LIYPLLGTILTAYSKYLKYMITEYLFDYANFLIDGKERRFNSFLKYGEEYKRFEYERKERERRERQYQQQKQWEETFRRW
QQQSGYGQGHYGQYNWHGNHNTHTNPNVNLKQKYEESCDILNVDYNADKDEIRKAFRKMAKKYHPDINDSPEATKTFKKI
NNAYEFLSDNIERYKNIQ
>Mature_258_residues
MNILKQGIGKLIYVTSLTIYKFFDLIIIFLEASVSLVKSIMSLFFGLVMVGGCFLLLILIGPVTLTLLTNPRLLITVIFL
LIYPLLGTILTAYSKYLKYMITEYLFDYANFLIDGKERRFNSFLKYGEEYKRFEYERKERERRERQYQQQKQWEETFRRW
QQQSGYGQGHYGQYNWHGNHNTHTNPNVNLKQKYEESCDILNVDYNADKDEIRKAFRKMAKKYHPDINDSPEATKTFKKI
NNAYEFLSDNIERYKNIQ

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 30817; Mature: 30817

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILKQGIGKLIYVTSLTIYKFFDLIIIFLEASVSLVKSIMSLFFGLVMVGGCFLLLILI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPVTLTLLTNPRLLITVIFLLIYPLLGTILTAYSKYLKYMITEYLFDYANFLIDGKERRF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NSFLKYGEEYKRFEYERKERERRERQYQQQKQWEETFRRWQQQSGYGQGHYGQYNWHGNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NTHTNPNVNLKQKYEESCDILNVDYNADKDEIRKAFRKMAKKYHPDINDSPEATKTFKKI
CCCCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
NNAYEFLSDNIERYKNIQ
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNILKQGIGKLIYVTSLTIYKFFDLIIIFLEASVSLVKSIMSLFFGLVMVGGCFLLLILI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GPVTLTLLTNPRLLITVIFLLIYPLLGTILTAYSKYLKYMITEYLFDYANFLIDGKERRF
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NSFLKYGEEYKRFEYERKERERRERQYQQQKQWEETFRRWQQQSGYGQGHYGQYNWHGNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NTHTNPNVNLKQKYEESCDILNVDYNADKDEIRKAFRKMAKKYHPDINDSPEATKTFKKI
CCCCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
NNAYEFLSDNIERYKNIQ
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA