| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188584973
Identifier: 188584973
GI number: 188584973
Start: 349473
End: 351020
Strand: Direct
Name: 188584973
Synonym: Nther_0333
Alternate gene names: NA
Gene position: 349473-351020 (Clockwise)
Preceding gene: 188584972
Following gene: 188584974
Centisome position: 11.04
GC content: 35.47
Gene sequence:
>1548_bases ATGCTGATATTAGACAAAAAAATAAACTGGAATATAAAACGGTATAAAAAACTTGTTGTTGTTGTCATTATTATTCCAAT TATTTTCTCTCTATTATTTTTAGGATGCAGTAGAGATGACACTTCTCAAGAAGAGAGTAAGGACATTGACTATATACAAC CTTTAGAGATAGTAGGTGATGTAGAAGATTTTGTTTCGATTGAAAATATAAATGATATATCTGACACTGTAAGCCTCGAA CACAGAGAAGAAGAATTAGAAGCATTACCATTAAATAAGCTGCTGGACAAATCACAACCTTATACTGAAGATTTTAAGGT TCTTTATGTTAGTCATGACGGATTCAGTGCCTCTATATCAAGTGATAATTTAGATGAATGTTATATTGCATTTACGCAGG AAAATGGTTGGGAAGCTATCAATAATAACCACCCCGTAAGCAGCAATATCAAGGATATTGAAAGTATTGCAGTGGTTGCT AATAATTTATCCCTTGAAGATGGCTTCAATATCATAAAACCAGGAGAAAATATAACTAGCATTTCTCCGGGTGAGATATA CAAAAATGGATATCATGTTTCAACTATGTACAGAGGGAGTTCAAGTGTGAGTCAAAATGGTGAAGACTTAGAAGCCAGTA CTTTTAATCGAAAGAAAATAATTGATATTGAGAACTACGTAACCCTTGATGATAGCGATGAAATTATTGTAGTTGGAAAA AAAGGTGAAGTAGAAAATTATCGACAAGATGGTACCTTTGTTCTTAATAAAAATAATATTGGTTATATGGCTGGAGATGA TATAGAAATCGATCAGGCTGCAGGAATCGTATTAGACCCCCCTGACAAAATGATTACAGAGGTTTACCATGATTCCAAGG AGCTGTTAACCCAAGATGAACAAGTACTGCTTATTTTAATAGACGGCTTGGGTTATCATCAGTATGAATATGCAATCGAC AATGGGTATGCGCCATTTTTAAAGGAACTCCCTGCTCCAGAGAAAGCCATGGTGACATATCCCCCGGTAACACCAGTTAA TGTGGCATCATCTTTAACAGGAGAGCTTCCTCATATTAATGGTGTATACAAAAGAGGGATTAGGCGCACAGAAGTTCCTA CAATTTTTGGATATTGTGAAGATCACGGGAAGAAATCAACGGCTATTATAGGTCCTAAGGGAACAATAGAGTTGGAAATT GATCCAATACTATCTATGGATGGGAACGATGATGGGAGTACTGATTATGAAAAAACTGAAAATGCTTTAAATGAAATGTC AAAAGACTATGATCTAATGTTTGTTCACTACAAAGATGTTGATATAGTTGGACACGATTATGGCGATATGGCTGAAGAGA CTATGGAAGCTATAGCCTGGAATGATAAACTTGTAGAAGAACTGGTAACCACTTGGGAAGGTAAAGTAATTATCTATGCC GATCATGGCATGCATGAAACCGAGGAAGGTGGAGATCACAATTCACTAATGACTGAAGATATGTTTATGCCTTACTGGAA ATTTGATGGAGGTGAAATTAATGACTAA
Upstream 100 bases:
>100_bases TTTATCTGGAGGACTTGGAGGAATTATAGCCAACGCAGTAGTAAAACAGTTTAAAAGTAAACTTCAGATATAAGCTGACA CAAGTATAAGGAGGGATTCA
Downstream 100 bases:
>100_bases AAAGGTTTTAGCTGCAACGGCGGTACTTATTGTAATAGTGGTGGTATTTGCCTATTTAAATGCTGCAGAAAGTGAAGACA GGTTACAAAGTCAAAGGGAA
Product: metalloenzyme domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MLILDKKINWNIKRYKKLVVVVIIIPIIFSLLFLGCSRDDTSQEESKDIDYIQPLEIVGDVEDFVSIENINDISDTVSLE HREEELEALPLNKLLDKSQPYTEDFKVLYVSHDGFSASISSDNLDECYIAFTQENGWEAINNNHPVSSNIKDIESIAVVA NNLSLEDGFNIIKPGENITSISPGEIYKNGYHVSTMYRGSSSVSQNGEDLEASTFNRKKIIDIENYVTLDDSDEIIVVGK KGEVENYRQDGTFVLNKNNIGYMAGDDIEIDQAAGIVLDPPDKMITEVYHDSKELLTQDEQVLLILIDGLGYHQYEYAID NGYAPFLKELPAPEKAMVTYPPVTPVNVASSLTGELPHINGVYKRGIRRTEVPTIFGYCEDHGKKSTAIIGPKGTIELEI DPILSMDGNDDGSTDYEKTENALNEMSKDYDLMFVHYKDVDIVGHDYGDMAEETMEAIAWNDKLVEELVTTWEGKVIIYA DHGMHETEEGGDHNSLMTEDMFMPYWKFDGGEIND
Sequences:
>Translated_515_residues MLILDKKINWNIKRYKKLVVVVIIIPIIFSLLFLGCSRDDTSQEESKDIDYIQPLEIVGDVEDFVSIENINDISDTVSLE HREEELEALPLNKLLDKSQPYTEDFKVLYVSHDGFSASISSDNLDECYIAFTQENGWEAINNNHPVSSNIKDIESIAVVA NNLSLEDGFNIIKPGENITSISPGEIYKNGYHVSTMYRGSSSVSQNGEDLEASTFNRKKIIDIENYVTLDDSDEIIVVGK KGEVENYRQDGTFVLNKNNIGYMAGDDIEIDQAAGIVLDPPDKMITEVYHDSKELLTQDEQVLLILIDGLGYHQYEYAID NGYAPFLKELPAPEKAMVTYPPVTPVNVASSLTGELPHINGVYKRGIRRTEVPTIFGYCEDHGKKSTAIIGPKGTIELEI DPILSMDGNDDGSTDYEKTENALNEMSKDYDLMFVHYKDVDIVGHDYGDMAEETMEAIAWNDKLVEELVTTWEGKVIIYA DHGMHETEEGGDHNSLMTEDMFMPYWKFDGGEIND >Mature_515_residues MLILDKKINWNIKRYKKLVVVVIIIPIIFSLLFLGCSRDDTSQEESKDIDYIQPLEIVGDVEDFVSIENINDISDTVSLE HREEELEALPLNKLLDKSQPYTEDFKVLYVSHDGFSASISSDNLDECYIAFTQENGWEAINNNHPVSSNIKDIESIAVVA NNLSLEDGFNIIKPGENITSISPGEIYKNGYHVSTMYRGSSSVSQNGEDLEASTFNRKKIIDIENYVTLDDSDEIIVVGK KGEVENYRQDGTFVLNKNNIGYMAGDDIEIDQAAGIVLDPPDKMITEVYHDSKELLTQDEQVLLILIDGLGYHQYEYAID NGYAPFLKELPAPEKAMVTYPPVTPVNVASSLTGELPHINGVYKRGIRRTEVPTIFGYCEDHGKKSTAIIGPKGTIELEI DPILSMDGNDDGSTDYEKTENALNEMSKDYDLMFVHYKDVDIVGHDYGDMAEETMEAIAWNDKLVEELVTTWEGKVIIYA DHGMHETEEGGDHNSLMTEDMFMPYWKFDGGEIND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57943; Mature: 57943
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILDKKINWNIKRYKKLVVVVIIIPIIFSLLFLGCSRDDTSQEESKDIDYIQPLEIVGD CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHCC VEDFVSIENINDISDTVSLEHREEELEALPLNKLLDKSQPYTEDFKVLYVSHDGFSASIS HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEECCCCEEECC SDNLDECYIAFTQENGWEAINNNHPVSSNIKDIESIAVVANNLSLEDGFNIIKPGENITS CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEHCCCCCHHCCCCEECCCCCCCC ISPGEIYKNGYHVSTMYRGSSSVSQNGEDLEASTFNRKKIIDIENYVTLDDSDEIIVVGK CCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCEEEEEC KGEVENYRQDGTFVLNKNNIGYMAGDDIEIDQAAGIVLDPPDKMITEVYHDSKELLTQDE CCCCCCCCCCCCEEEECCCCCEECCCCEEECCCCCEEECCCHHHHHHHHHCCHHHHCCCC QVLLILIDGLGYHQYEYAIDNGYAPFLKELPAPEKAMVTYPPVTPVNVASSLTGELPHIN EEEEEEEECCCCEEEEEEECCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCCCC GVYKRGIRRTEVPTIFGYCEDHGKKSTAIIGPKGTIELEIDPILSMDGNDDGSTDYEKTE HHHHCCCCCCCCCEEEEEHHHCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHH NALNEMSKDYDLMFVHYKDVDIVGHDYGDMAEETMEAIAWNDKLVEELVTTWEGKVIIYA HHHHHHCCCCEEEEEEEECEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEE DHGMHETEEGGDHNSLMTEDMFMPYWKFDGGEIND CCCCCCCCCCCCCCCEEEHHHCCCEEECCCCCCCC >Mature Secondary Structure MLILDKKINWNIKRYKKLVVVVIIIPIIFSLLFLGCSRDDTSQEESKDIDYIQPLEIVGD CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHCC VEDFVSIENINDISDTVSLEHREEELEALPLNKLLDKSQPYTEDFKVLYVSHDGFSASIS HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEECCCCEEECC SDNLDECYIAFTQENGWEAINNNHPVSSNIKDIESIAVVANNLSLEDGFNIIKPGENITS CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEHCCCCCHHCCCCEECCCCCCCC ISPGEIYKNGYHVSTMYRGSSSVSQNGEDLEASTFNRKKIIDIENYVTLDDSDEIIVVGK CCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCEEEEEC KGEVENYRQDGTFVLNKNNIGYMAGDDIEIDQAAGIVLDPPDKMITEVYHDSKELLTQDE CCCCCCCCCCCCEEEECCCCCEECCCCEEECCCCCEEECCCHHHHHHHHHCCHHHHCCCC QVLLILIDGLGYHQYEYAIDNGYAPFLKELPAPEKAMVTYPPVTPVNVASSLTGELPHIN EEEEEEEECCCCEEEEEEECCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCCCCCC GVYKRGIRRTEVPTIFGYCEDHGKKSTAIIGPKGTIELEIDPILSMDGNDDGSTDYEKTE HHHHCCCCCCCCCEEEEEHHHCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHH NALNEMSKDYDLMFVHYKDVDIVGHDYGDMAEETMEAIAWNDKLVEELVTTWEGKVIIYA HHHHHHCCCCEEEEEEEECEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEE DHGMHETEEGGDHNSLMTEDMFMPYWKFDGGEIND CCCCCCCCCCCCCCCEEEHHHCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA