| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is yheD [H]
Identifier: 188584966
GI number: 188584966
Start: 341374
End: 344172
Strand: Direct
Name: yheD [H]
Synonym: Nther_0326
Alternate gene names: 188584966
Gene position: 341374-344172 (Clockwise)
Preceding gene: 188584964
Following gene: 188584970
Centisome position: 10.78
GC content: 31.69
Gene sequence:
>2799_bases TTGTCTATGATTCCAGTAACAATAATGACCAGCAATGAAAATGTTATTTCAATATCTGATAAAGAAAATATAATTTTAAA AAGCTTAGGGGAAAAGAAAACCGATGTTCAGCTAATTGCTGGTAACAGAACCTGCTGGATTAAGCTAAAGCTTGTTTCTA AAAAAGGTTTTGATAATATTTTTTATATGACAGAATCAGTGAAAGAAGAGTTAATGTTATCCGATTCCTATCAATTAAAT TTGAAACTAACTGAACAAGGCCTTGAATTAGGTCCTTTTTTGGGTGTTTTAATCAGCGAAAGTAAACACGAAAAACTAGT GATTGGTGACTTTGATAGTATATACTCGAATTTTCAAAATTGGATGGCACAAAAAAATGGACTAATTTACTTTTTTACTC TAAAAGATATTGATATAAATAATCTAATAGTCACAGGACATTATTGGGATAAAGATTCAAACTGGTCACAAAAGAAATTT CCTTTTCCTAAAGTAGTATATGACCGTTGCTTTGGATTAGAAGGAAGGGCTGATTCGTACAAACTAAGGTCCTTAGTAAA TACTCATGGTCTTAACACATTTATTTATAACTGGCCTGTTAAAATTGGCAAACTGGAAACATACGAATCTTTAAAAACAT TCCCCTATTTAAAAGGAGTAATTCCGCCTTTTATAGATTACTCTCGAGAAAACCTGCAAAAATTTATTAATGACCACAAG GCCATCATATTAAAACCGGATAAAATGTATAAAGGTAAAGGAATTGCTTCATTAGAAAAAAAAGACGAAAAATATATACT AAAATACAGTTTAGAAGATGAAACTAATGAATCAGATAACGATCAAATCAAGCATGAATTTGAAGATCTAGATTCAGCTA TACAAAAAATCAATGAAATTTTAGATATTTCTAGGGGGTATGTAATTCAAAAGAAAATAACCTTAGGGACTTTCTTAGGG AATAATTTTGATATTAGGGTGATGTTACAACGAAGACATCGTTATAAATGGGAGGTAACGGGAATAAATGCTCGTATTTC ACCAACTGATAGTATAATTACAAGTCCAAGAAGTGGTGGTAAGGTAATAGCTATAGATAAACTGCTTAAAAGGGTATTTC CAGGCAAAGAGGAGTACGTAAAAAATAGGATAATATCTGTTTCCAAAAGAATTGGCACATCTTTAGAAGAAAAATATGGG TTTATAGGAGAGCTAGGAGTTGACCTGGCATTAGAAGCTAATGGAGCTATTTCATTAATAGAAGTGAATAGTAAACCCTT AAAAGTTAGTTTTAACAGATTAAAAAATAAAGGGCTAAAAAAGAGAATCAACCAAATCCCCATACTTCTAGGGTGTGAAT TATCAGGGTTTGACCCAGCTAAAATTCATCCAAAACAAAAATTGACCTCTGAATACAACAAAAATGATGTCTTTCAATTT AAGAAAAGTCCAAATAAAATTATTGGAAATGAATTAGAGTATCCGCCAATATATTTGAATAACTATCAAATAAAATTATT TAAGCTAAATGAATACGATAAAGTAGAAGTACAAATTGGACAAAAGAGTGAGGAAATGATAGTTAAACAACAAAATTTTG ATAGTGATCCAAATTTTGTTTATCTTGATAGTAAAGCTTACGAAGATTTTGCTATTCCAAGCAATACCTTAGTAAAGTTT ATTGCTAAAAAAGGATCCAAACTCCAGTTTGGTATAACAATGGGGATCACTATTTCATCAACTACATTTAAATTCTTAAA AAGCAACGAACAGGGTACAGAATTGGATGAAACCGTACATTTAGCAAGTCAATACGGTGTTATGTTTTATTGTATTGATT TAGAAAGTATAGATTGGAATAAGCAAACCATTAAAGGACTATATTATGATATAAATTCGCAAAAGTGGAGAGAATCTCAG TTACAGTTTCCTCAAATCCTTTATGATCAAGCTACTTACCCCGGTGAACCTGTTAGAAGACAGACTATAAAGGAGCAAAA TCAATCATTAAGACAAAATCTTAGTGAACTAGAAGCAATTAATAATAAGAGGTTTTTTGGTAAATGGGAAACATGGGATA GTGTCAACTTTTTTGAAGAATTGAAACAACATTTACCAGAGACTAGAATACTAACTTCAAACAATTTGCATGAAATGTTA GCAAAATATCAAATGATATATTGTAAAAGTAATTATGGAAGCCATGGTACAGAAGTTGTTAGAATTTATAATTATAATCA TGGGTATTGCTGCGAAATAGGGGGGAAAACAGTAGAAACTTGGACTTTTTTAGATAAGAAGGTACTAATTAAATTTGTAA TTGAACTTGTAGGAGAGAATGGAATTGTCCAACAGCCTGTTTATTTGGCTAATCTAAATGGCCGCCCCTTTGATATGAGA ATTCTAGCTCAGAAGGATCATTCTAACAGTTGGAGCCTTACGGTTATTTCAATTAGGATAGGTCAAAAAAATGCAGTTAT AACTAATGTTGCCGGTGGGGCTGATGAGCTGATTGTTGTTCCAGGAGATAAATTAGCATACCCAATCCCTGGTTGGGAAA TCCTTCACGAGTTTACTACCAAAATATGTGATGCTATAGAAGCTTCTTTTGGAATGCAAGGGGAGATTGGACTTGATGTA GCGGTGGATGTAAATCAACAGTTATGGTTAATTGAAGCAAATAGTAAACCAGATATAGCTGGTTTGAATAACGTAATGCC ACAAATAGATTATAGAAGAATTTTATCTATGCCTATACTTTATGCTACTTACCTTTTAGATCAAATGGAATATGGTTAA
Upstream 100 bases:
>100_bases TTTATTCAATATAATACTATGTCATTTTTAATCAAGAATTGATTATTAACTTCACTAAAATATATATTAATACATTATAT GTTGTAAGGAGGTGAATAAC
Downstream 100 bases:
>100_bases TGGAACTGTTAATGTCCGGTATGGGTACAAAATCAGCTAAAAATTAAAGTTTTCTTTTAAAGTTAGACTTTAAATCATGA TAGAACGTAAACTGGCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 932; Mature: 931
Protein sequence:
>932_residues MSMIPVTIMTSNENVISISDKENIILKSLGEKKTDVQLIAGNRTCWIKLKLVSKKGFDNIFYMTESVKEELMLSDSYQLN LKLTEQGLELGPFLGVLISESKHEKLVIGDFDSIYSNFQNWMAQKNGLIYFFTLKDIDINNLIVTGHYWDKDSNWSQKKF PFPKVVYDRCFGLEGRADSYKLRSLVNTHGLNTFIYNWPVKIGKLETYESLKTFPYLKGVIPPFIDYSRENLQKFINDHK AIILKPDKMYKGKGIASLEKKDEKYILKYSLEDETNESDNDQIKHEFEDLDSAIQKINEILDISRGYVIQKKITLGTFLG NNFDIRVMLQRRHRYKWEVTGINARISPTDSIITSPRSGGKVIAIDKLLKRVFPGKEEYVKNRIISVSKRIGTSLEEKYG FIGELGVDLALEANGAISLIEVNSKPLKVSFNRLKNKGLKKRINQIPILLGCELSGFDPAKIHPKQKLTSEYNKNDVFQF KKSPNKIIGNELEYPPIYLNNYQIKLFKLNEYDKVEVQIGQKSEEMIVKQQNFDSDPNFVYLDSKAYEDFAIPSNTLVKF IAKKGSKLQFGITMGITISSTTFKFLKSNEQGTELDETVHLASQYGVMFYCIDLESIDWNKQTIKGLYYDINSQKWRESQ LQFPQILYDQATYPGEPVRRQTIKEQNQSLRQNLSELEAINNKRFFGKWETWDSVNFFEELKQHLPETRILTSNNLHEML AKYQMIYCKSNYGSHGTEVVRIYNYNHGYCCEIGGKTVETWTFLDKKVLIKFVIELVGENGIVQQPVYLANLNGRPFDMR ILAQKDHSNSWSLTVISIRIGQKNAVITNVAGGADELIVVPGDKLAYPIPGWEILHEFTTKICDAIEASFGMQGEIGLDV AVDVNQQLWLIEANSKPDIAGLNNVMPQIDYRRILSMPILYATYLLDQMEYG
Sequences:
>Translated_932_residues MSMIPVTIMTSNENVISISDKENIILKSLGEKKTDVQLIAGNRTCWIKLKLVSKKGFDNIFYMTESVKEELMLSDSYQLN LKLTEQGLELGPFLGVLISESKHEKLVIGDFDSIYSNFQNWMAQKNGLIYFFTLKDIDINNLIVTGHYWDKDSNWSQKKF PFPKVVYDRCFGLEGRADSYKLRSLVNTHGLNTFIYNWPVKIGKLETYESLKTFPYLKGVIPPFIDYSRENLQKFINDHK AIILKPDKMYKGKGIASLEKKDEKYILKYSLEDETNESDNDQIKHEFEDLDSAIQKINEILDISRGYVIQKKITLGTFLG NNFDIRVMLQRRHRYKWEVTGINARISPTDSIITSPRSGGKVIAIDKLLKRVFPGKEEYVKNRIISVSKRIGTSLEEKYG FIGELGVDLALEANGAISLIEVNSKPLKVSFNRLKNKGLKKRINQIPILLGCELSGFDPAKIHPKQKLTSEYNKNDVFQF KKSPNKIIGNELEYPPIYLNNYQIKLFKLNEYDKVEVQIGQKSEEMIVKQQNFDSDPNFVYLDSKAYEDFAIPSNTLVKF IAKKGSKLQFGITMGITISSTTFKFLKSNEQGTELDETVHLASQYGVMFYCIDLESIDWNKQTIKGLYYDINSQKWRESQ LQFPQILYDQATYPGEPVRRQTIKEQNQSLRQNLSELEAINNKRFFGKWETWDSVNFFEELKQHLPETRILTSNNLHEML AKYQMIYCKSNYGSHGTEVVRIYNYNHGYCCEIGGKTVETWTFLDKKVLIKFVIELVGENGIVQQPVYLANLNGRPFDMR ILAQKDHSNSWSLTVISIRIGQKNAVITNVAGGADELIVVPGDKLAYPIPGWEILHEFTTKICDAIEASFGMQGEIGLDV AVDVNQQLWLIEANSKPDIAGLNNVMPQIDYRRILSMPILYATYLLDQMEYG >Mature_931_residues SMIPVTIMTSNENVISISDKENIILKSLGEKKTDVQLIAGNRTCWIKLKLVSKKGFDNIFYMTESVKEELMLSDSYQLNL KLTEQGLELGPFLGVLISESKHEKLVIGDFDSIYSNFQNWMAQKNGLIYFFTLKDIDINNLIVTGHYWDKDSNWSQKKFP FPKVVYDRCFGLEGRADSYKLRSLVNTHGLNTFIYNWPVKIGKLETYESLKTFPYLKGVIPPFIDYSRENLQKFINDHKA IILKPDKMYKGKGIASLEKKDEKYILKYSLEDETNESDNDQIKHEFEDLDSAIQKINEILDISRGYVIQKKITLGTFLGN NFDIRVMLQRRHRYKWEVTGINARISPTDSIITSPRSGGKVIAIDKLLKRVFPGKEEYVKNRIISVSKRIGTSLEEKYGF IGELGVDLALEANGAISLIEVNSKPLKVSFNRLKNKGLKKRINQIPILLGCELSGFDPAKIHPKQKLTSEYNKNDVFQFK KSPNKIIGNELEYPPIYLNNYQIKLFKLNEYDKVEVQIGQKSEEMIVKQQNFDSDPNFVYLDSKAYEDFAIPSNTLVKFI AKKGSKLQFGITMGITISSTTFKFLKSNEQGTELDETVHLASQYGVMFYCIDLESIDWNKQTIKGLYYDINSQKWRESQL QFPQILYDQATYPGEPVRRQTIKEQNQSLRQNLSELEAINNKRFFGKWETWDSVNFFEELKQHLPETRILTSNNLHEMLA KYQMIYCKSNYGSHGTEVVRIYNYNHGYCCEIGGKTVETWTFLDKKVLIKFVIELVGENGIVQQPVYLANLNGRPFDMRI LAQKDHSNSWSLTVISIRIGQKNAVITNVAGGADELIVVPGDKLAYPIPGWEILHEFTTKICDAIEASFGMQGEIGLDVA VDVNQQLWLIEANSKPDIAGLNNVMPQIDYRRILSMPILYATYLLDQMEYG
Specific function: Involved in sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane; Peripheral membrane protein. Spore wall, spore coat. Note=Forms two rings around the forespore that are offset from its midpoint, before it eventually redistributes to form a shell around the developing spore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yheC/yheD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107102; Mature: 106971
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMIPVTIMTSNENVISISDKENIILKSLGEKKTDVQLIAGNRTCWIKLKLVSKKGFDNI CCEEEEEEEECCCCEEEECCCCCCHHHHCCCCCCCEEEEECCCEEEEEEEEECCCCCCCE FYMTESVKEELMLSDSYQLNLKLTEQGLELGPFLGVLISESKHEKLVIGDFDSIYSNFQN EEEHHHHHHHHEECCCEEEEEEEECCCCCCCCHHHHEECCCCCCEEEEECHHHHHHHHHH WMAQKNGLIYFFTLKDIDINNLIVTGHYWDKDSNWSQKKFPFPKVVYDRCFGLEGRADSY HHHHCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCHH KLRSLVNTHGLNTFIYNWPVKIGKLETYESLKTFPYLKGVIPPFIDYSRENLQKFINDHK HHHHHHHHCCCEEEEEECCEEECCCHHHHHHHHCHHHHCCCCHHHCCCHHHHHHHHCCCC AIILKPDKMYKGKGIASLEKKDEKYILKYSLEDETNESDNDQIKHEFEDLDSAIQKINEI EEEECCCHHCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH LDISRGYVIQKKITLGTFLGNNFDIRVMLQRRHRYKWEVTGINARISPTDSIITSPRSGG HHCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECEEECCCCHHEECCCCCC KVIAIDKLLKRVFPGKEEYVKNRIISVSKRIGTSLEEKYGFIGELGVDLALEANGAISLI EEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEECCCEEEEECCCCEEEE EVNSKPLKVSFNRLKNKGLKKRINQIPILLGCELSGFDPAKIHPKQKLTSEYNKNDVFQF EECCCCEEEEHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEE KKSPNKIIGNELEYPPIYLNNYQIKLFKLNEYDKVEVQIGQKSEEMIVKQQNFDSDPNFV CCCCCHHCCCCCCCCCEEEECEEEEEEEECCCCEEEEEECCCCHHHHHHHCCCCCCCCEE YLDSKAYEDFAIPSNTLVKFIAKKGSKLQFGITMGITISSTTFKFLKSNEQGTELDETVH EECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCEEEEHHCCCCCCCHHHHHH LASQYGVMFYCIDLESIDWNKQTIKGLYYDINSQKWRESQLQFPQILYDQATYPGEPVRR HHHHCCEEEEEEEECCCCCCHHHHEEEEEECCCCHHHHHHCCCCHHHHHCCCCCCCHHHH QTIKEQNQSLRQNLSELEAINNKRFFGKWETWDSVNFFEELKQHLPETRILTSNNLHEML HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHH AKYQMIYCKSNYGSHGTEVVRIYNYNHGYCCEIGGKTVETWTFLDKKVLIKFVIELVGEN HHEEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCC GIVQQPVYLANLNGRPFDMRILAQKDHSNSWSLTVISIRIGQKNAVITNVAGGADELIVV CCEECCEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCCCCCEEEE PGDKLAYPIPGWEILHEFTTKICDAIEASFGMQGEIGLDVAVDVNQQLWLIEANSKPDIA CCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCC GLNNVMPQIDYRRILSMPILYATYLLDQMEYG CHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SMIPVTIMTSNENVISISDKENIILKSLGEKKTDVQLIAGNRTCWIKLKLVSKKGFDNI CEEEEEEEECCCCEEEECCCCCCHHHHCCCCCCCEEEEECCCEEEEEEEEECCCCCCCE FYMTESVKEELMLSDSYQLNLKLTEQGLELGPFLGVLISESKHEKLVIGDFDSIYSNFQN EEEHHHHHHHHEECCCEEEEEEEECCCCCCCCHHHHEECCCCCCEEEEECHHHHHHHHHH WMAQKNGLIYFFTLKDIDINNLIVTGHYWDKDSNWSQKKFPFPKVVYDRCFGLEGRADSY HHHHCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCHH KLRSLVNTHGLNTFIYNWPVKIGKLETYESLKTFPYLKGVIPPFIDYSRENLQKFINDHK HHHHHHHHCCCEEEEEECCEEECCCHHHHHHHHCHHHHCCCCHHHCCCHHHHHHHHCCCC AIILKPDKMYKGKGIASLEKKDEKYILKYSLEDETNESDNDQIKHEFEDLDSAIQKINEI EEEECCCHHCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH LDISRGYVIQKKITLGTFLGNNFDIRVMLQRRHRYKWEVTGINARISPTDSIITSPRSGG HHCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECEEECCCCHHEECCCCCC KVIAIDKLLKRVFPGKEEYVKNRIISVSKRIGTSLEEKYGFIGELGVDLALEANGAISLI EEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEECCCEEEEECCCCEEEE EVNSKPLKVSFNRLKNKGLKKRINQIPILLGCELSGFDPAKIHPKQKLTSEYNKNDVFQF EECCCCEEEEHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEE KKSPNKIIGNELEYPPIYLNNYQIKLFKLNEYDKVEVQIGQKSEEMIVKQQNFDSDPNFV CCCCCHHCCCCCCCCCEEEECEEEEEEEECCCCEEEEEECCCCHHHHHHHCCCCCCCCEE YLDSKAYEDFAIPSNTLVKFIAKKGSKLQFGITMGITISSTTFKFLKSNEQGTELDETVH EECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCEEEEHHCCCCCCCHHHHHH LASQYGVMFYCIDLESIDWNKQTIKGLYYDINSQKWRESQLQFPQILYDQATYPGEPVRR HHHHCCEEEEEEEECCCCCCHHHHEEEEEECCCCHHHHHHCCCCHHHHHCCCCCCCHHHH QTIKEQNQSLRQNLSELEAINNKRFFGKWETWDSVNFFEELKQHLPETRILTSNNLHEML HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHH AKYQMIYCKSNYGSHGTEVVRIYNYNHGYCCEIGGKTVETWTFLDKKVLIKFVIELVGEN HHEEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCC GIVQQPVYLANLNGRPFDMRILAQKDHSNSWSLTVISIRIGQKNAVITNVAGGADELIVV CCEECCEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCCCCCEEEE PGDKLAYPIPGWEILHEFTTKICDAIEASFGMQGEIGLDVAVDVNQQLWLIEANSKPDIA CCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCC GLNNVMPQIDYRRILSMPILYATYLLDQMEYG CHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]