| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is insN1 [C]
Identifier: 188584898
GI number: 188584898
Start: 270364
End: 270633
Strand: Reverse
Name: insN1 [C]
Synonym: Nther_0256
Alternate gene names: 188584898
Gene position: 270633-270364 (Counterclockwise)
Preceding gene: 188584911
Following gene: 188584885
Centisome position: 8.55
GC content: 32.59
Gene sequence:
>270_bases ATGAAAATGAGTCGTAAAAAATACAGTGAAGACTTTAAAAAAACAATAGTTGATTTATATCACTCAGGTAGTTCTGTAAA AGATCTGTCTAGCGAGTATGGCGTAACTGAAGTTACTGTTTACAAATGGATTAAGCAATTAACCCCAGTTCAATCAGGTG AAGAAGAAGTAACACCTAAAGATATAAATGAAATGCAAAAAGAAATGCAACGTATTAAACAGGAGAGTGAAATCTTTAAA AAGGCTATGGCCATATTCGCGAAAAAGTAG
Upstream 100 bases:
>100_bases GCCAGCTATATTATAAATTAAAAGAAAGTTTGATGTTAGTATAGTTTCATGGACACATTTTAGTTAAGTCTATAAAATAG AAGTATGAAAGGATGTGTCT
Downstream 100 bases:
>100_bases ACACTCAAGAACTAACTGAATTTATAAAAGAACACAAAGAAGACTATCCCATTGCTATCATGTGTAAAGTTTTGAAGCTT CCTAAAAGTACTTACTATCA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MKMSRKKYSEDFKKTIVDLYHSGSSVKDLSSEYGVTEVTVYKWIKQLTPVQSGEEEVTPKDINEMQKEMQRIKQESEIFK KAMAIFAKK
Sequences:
>Translated_89_residues MKMSRKKYSEDFKKTIVDLYHSGSSVKDLSSEYGVTEVTVYKWIKQLTPVQSGEEEVTPKDINEMQKEMQRIKQESEIFK KAMAIFAKK >Mature_89_residues MKMSRKKYSEDFKKTIVDLYHSGSSVKDLSSEYGVTEVTVYKWIKQLTPVQSGEEEVTPKDINEMQKEMQRIKQESEIFK KAMAIFAKK
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10413; Mature: 10413
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMSRKKYSEDFKKTIVDLYHSGSSVKDLSSEYGVTEVTVYKWIKQLTPVQSGEEEVTPK CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHH DINEMQKEMQRIKQESEIFKKAMAIFAKK HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKMSRKKYSEDFKKTIVDLYHSGSSVKDLSSEYGVTEVTVYKWIKQLTPVQSGEEEVTPK CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHH DINEMQKEMQRIKQESEIFKKAMAIFAKK HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA