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The map label for this gene is rpl7Ae [H]

Identifier: 188584830

GI number: 188584830

Start: 215009

End: 215257

Strand: Direct

Name: rpl7Ae [H]

Synonym: Nther_0188

Alternate gene names: 188584830

Gene position: 215009-215257 (Clockwise)

Preceding gene: 188584829

Following gene: 188584831

Centisome position: 6.79

GC content: 37.75

Gene sequence:

>249_bases
ATGTCCCTCAGTAAACTAAAAAAGGCCTCCCAAACAGCTATTGGTGTAAATGAAAGTTTAAAAGCTGTAGAAGAGGGTGC
GGCCAAAATGGTATTTATAGCGCAGGACGCAGATGATCATATAGTTGAGCCCTTAAAACAAAAATGTAATGAACTGCAAC
TTGATATCAAATATGTAACTACCATGAAAGAGCTAGGTCAAGCAGCTGGTATTGAAGTGAATGCTACATCAGCTTGTATA
ATTGACTAA

Upstream 100 bases:

>100_bases
AGACGAACAAGAAATTGGAGAAATAACAGTTGACATGGGGGAATAATACTGCTAAAATACGTAAGTGTGTATTTTGGACA
GCATTTAAGGAGGGGTCTCC

Downstream 100 bases:

>100_bases
AAGGTAAACTCGGGAGGGGTATATATCCCTCCCGGGAATTGTGTTTAGCAGATAGTAAAGGAGGTGTATTGAGTGCCAAC
AATAAACCAGTTGATTAGAA

Product: ribosomal protein L7Ae/L30e/S12e/Gadd45

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSLSKLKKASQTAIGVNESLKAVEEGAAKMVFIAQDADDHIVEPLKQKCNELQLDIKYVTTMKELGQAAGIEVNATSACI
ID

Sequences:

>Translated_82_residues
MSLSKLKKASQTAIGVNESLKAVEEGAAKMVFIAQDADDHIVEPLKQKCNELQLDIKYVTTMKELGQAAGIEVNATSACI
ID
>Mature_81_residues
SLSKLKKASQTAIGVNESLKAVEEGAAKMVFIAQDADDHIVEPLKQKCNELQLDIKYVTTMKELGQAAGIEVNATSACII
D

Specific function: Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs [H]

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004038
- InterPro:   IPR018492
- InterPro:   IPR022481
- InterPro:   IPR004037
- InterPro:   IPR000948 [H]

Pfam domain/function: PF01248 Ribosomal_L7Ae [H]

EC number: NA

Molecular weight: Translated: 8807; Mature: 8676

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSKLKKASQTAIGVNESLKAVEEGAAKMVFIAQDADDHIVEPLKQKCNELQLDIKYVT
CCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
TMKELGQAAGIEVNATSACIID
HHHHHHHHCCEEECCCCEEECC
>Mature Secondary Structure 
SLSKLKKASQTAIGVNESLKAVEEGAAKMVFIAQDADDHIVEPLKQKCNELQLDIKYVT
CHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
TMKELGQAAGIEVNATSACIID
HHHHHHHHCCEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA