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The map label for this gene is mcp1 [H]

Identifier: 188584804

GI number: 188584804

Start: 186090

End: 186944

Strand: Reverse

Name: mcp1 [H]

Synonym: Nther_0162

Alternate gene names: 188584804

Gene position: 186944-186090 (Counterclockwise)

Preceding gene: 188584811

Following gene: 188584803

Centisome position: 5.91

GC content: 37.66

Gene sequence:

>855_bases
ATGAATGTAGGAATTGTTGGCGGTGGCAATGGTGGTGAGTCTTTACTAAAACTTTTTCGTGATTTAGATGATGTTAATAT
CTTTTGGGTCTGTGACATTAATACAGAGGCACCTGCCATTGTTCTCGCAAAAGATATGGGTATAAGAACAATTTCGGATT
TTAATGATTATATTAACACGGATTTAGATGTAGTTATTGATGTGACGGGAGTGGCTAAAGTAAATGAACAACTGAAAGAG
CTAGTTCCCCATGGAGTCAGCATCATGGATCCATCAGCTGCCAATCTTTTGATCTACACTGTAGAAGATAGGGAGCAAAT
GAACGAAAATCTAAAGGCTCAAGCCGATCAATTGACTGATGTAGCTAACACTCTTAGTTCCAATATCCAACAAATAAAAT
CTTCCATGGAAGAAATTACTACAGGAGCAGAAAACTTGGCAAATTTAGGACAAGATTTAAGCAAACGAGCTAAGGATGCT
GAGTCCGATGCTAACAGTATTAATGAAGTTTTAGAGTTTATACAAAAAATAGCGAATCAAACAAGAATAATTGGCTTGAA
CGCCGCTATAGAAGCTGCAAGGGTTGGCGAAAAAGGAAAAGGCTTTGGAGTTGTCGCCACTGAAGTGAAAAAATTAGCCG
ATGACAGTAGTAATTCTATCCAAGAAGTTGAAGAAACTATAACAAGGGTTGTAAATCATATCAAGGAAATGAATAGTGAA
ATCCAAACCAGCAGTGATGTAGCTGAAAGTCAAGCTGCTTCCACCCAGGAAATTCTTGCAAGCGTTCAAGAAATGACGGA
AATATCAGAAAATCTTATTTCAACAGCACAAAATCTCTCGGAATCAAACACATAG

Upstream 100 bases:

>100_bases
CAATAGAAAATTTTACAGTACAACAACTAACTAAATATAACAGCACCTTTAATAATAGATAATTAAATAATGACTTAATT
TAAGCCTAGGGGGGGGTTGA

Downstream 100 bases:

>100_bases
TCTGATTTGGGATTGATTTGATCTTATTTTAGCCATTAAGCTTAACCCTCTAATCATCTGTCAATATTTTTACTTTGCCA
CAAATAGTAACTTACATCAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNVGIVGGGNGGESLLKLFRDLDDVNIFWVCDINTEAPAIVLAKDMGIRTISDFNDYINTDLDVVIDVTGVAKVNEQLKE
LVPHGVSIMDPSAANLLIYTVEDREQMNENLKAQADQLTDVANTLSSNIQQIKSSMEEITTGAENLANLGQDLSKRAKDA
ESDANSINEVLEFIQKIANQTRIIGLNAAIEAARVGEKGKGFGVVATEVKKLADDSSNSIQEVEETITRVVNHIKEMNSE
IQTSSDVAESQAASTQEILASVQEMTEISENLISTAQNLSESNT

Sequences:

>Translated_284_residues
MNVGIVGGGNGGESLLKLFRDLDDVNIFWVCDINTEAPAIVLAKDMGIRTISDFNDYINTDLDVVIDVTGVAKVNEQLKE
LVPHGVSIMDPSAANLLIYTVEDREQMNENLKAQADQLTDVANTLSSNIQQIKSSMEEITTGAENLANLGQDLSKRAKDA
ESDANSINEVLEFIQKIANQTRIIGLNAAIEAARVGEKGKGFGVVATEVKKLADDSSNSIQEVEETITRVVNHIKEMNSE
IQTSSDVAESQAASTQEILASVQEMTEISENLISTAQNLSESNT
>Mature_284_residues
MNVGIVGGGNGGESLLKLFRDLDDVNIFWVCDINTEAPAIVLAKDMGIRTISDFNDYINTDLDVVIDVTGVAKVNEQLKE
LVPHGVSIMDPSAANLLIYTVEDREQMNENLKAQADQLTDVANTLSSNIQQIKSSMEEITTGAENLANLGQDLSKRAKDA
ESDANSINEVLEFIQKIANQTRIIGLNAAIEAARVGEKGKGFGVVATEVKKLADDSSNSIQEVEETITRVVNHIKEMNSE
IQTSSDVAESQAASTQEILASVQEMTEISENLISTAQNLSESNT

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=184, Percent_Identity=32.6086956521739, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI2367378, Length=111, Percent_Identity=36.036036036036, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788194, Length=150, Percent_Identity=32.6666666666667, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789453, Length=190, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788195, Length=102, Percent_Identity=39.2156862745098, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 30671; Mature: 30671

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVGIVGGGNGGESLLKLFRDLDDVNIFWVCDINTEAPAIVLAKDMGIRTISDFNDYINT
CCEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCC
DLDVVIDVTGVAKVNEQLKELVPHGVSIMDPSAANLLIYTVEDREQMNENLKAQADQLTD
CCEEEEEEHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
VANTLSSNIQQIKSSMEEITTGAENLANLGQDLSKRAKDAESDANSINEVLEFIQKIANQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
TRIIGLNAAIEAARVGEKGKGFGVVATEVKKLADDSSNSIQEVEETITRVVNHIKEMNSE
CEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IQTSSDVAESQAASTQEILASVQEMTEISENLISTAQNLSESNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVGIVGGGNGGESLLKLFRDLDDVNIFWVCDINTEAPAIVLAKDMGIRTISDFNDYINT
CCEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCC
DLDVVIDVTGVAKVNEQLKELVPHGVSIMDPSAANLLIYTVEDREQMNENLKAQADQLTD
CCEEEEEEHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
VANTLSSNIQQIKSSMEEITTGAENLANLGQDLSKRAKDAESDANSINEVLEFIQKIANQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
TRIIGLNAAIEAARVGEKGKGFGVVATEVKKLADDSSNSIQEVEETITRVVNHIKEMNSE
CEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IQTSSDVAESQAASTQEILASVQEMTEISENLISTAQNLSESNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]