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The map label for this gene is fimD

Identifier: 188534985

GI number:

Start: 3191316

End: 3193943

Strand: Reverse

Name: fimD

Synonym: ETA_28660

Alternate gene names: NA

Gene position: NA

Preceding gene: 188534986

Following gene: 188534984

Centisome position: NA

GC content: NA

Gene sequence:

>2628_bases
ATGTCATACCTGGATTACGGAGCAGGCAGCGATAAAATGACAACACTCGACACCCGGGGGAAGACCCTGAAAAGAACGAT
GCTTACGCCGCTAGCGATGCTACTGGTGGCATCGACATTCTCTGCGCGTGCAGACAACTACTTCAACCCCCGGTTCCTGT
CTGACGATCCTGAGTCCGTTGCCGACCTGTCCGGTTTTGAGAAAGGGCTGGAGGCCCCCCCCGGGACCTATCGCGTAGAC
ATCTATATGAACGATGGCTACATGTCTACCCGGGACGTCACCTTTGAATACTCCACTGACGGCAAACGGCTGGAACCCTG
CCTGACCCGTTCGCAGCTGGCGACACTCGGGGTGAATACCCTGACCCTGCCGGACATTGCGGTGATGAAGAGTACCGCGT
GTGTCCCCTTTACCCGGTTGATTGCTGATTCCTCAAGCAGCTTTGACGTTGGCCGCCAGCGGCTCAATATCAGCGTCCCA
CAGGCGTTTATGGGCAATCAGGCTCGTGGCTACATTGCTCCGGAGCTCTGGGATAACGGTATTACCGCCGGCCTGCTCAA
CTACAACTATACCGGCAGCGAAGTGCGCAGTCAGAATGGAGGAACGCGTAACTACTCGTACCTTAACCTGCAAAGCGGGC
TTAACGTTGGTGCATGGCGGCTGCGTGATAACTCTACCTGGAGTTACAGCAGCGGGGCGGCATCGAACGAGAATCGCTGG
CAGCACGTCAATACCTGGCTTGAGCGTGACATTACGGCCTGGCGCAGCCGCCTGACCGTGGGTGACAGCTATACCGCGGG
CGATATCTTTGAGGGTATCAATTTCCGCGGCATTCAGGTGGCCTCTGATGACAATATGCTTCCCGACAGTCAGCGTGGAT
TCGCTCCTGTGATCCATGGTATTGCGCGCGGTACGGCGCGCGTTTCGATCAAACAAAACGGCTATGAAATCTACCAGACT
ACCGTCCCGCCGGGCGCATTTACCATCGGCGATCTTTATGCGGCGGGAAACAGCGGCGATCTGCAGGTAACGGTTAAAGA
GGCGGATGGATCTGTTCAGGTGTTTACCGTGCCGTTCTCATCCGTTCCGATGTTACAGCGAGAAGGGCAGGTCAAGTTTG
CGGCTACTGCGGGACAGTATCGCAGTGGCAACGGTATGCAGGACAAACCCACGTTTTTCCAGGGAACGTCGCTTTGGGGG
CTGCCCGACGGCTGGACGGTTTACGGGGGCACGCGTGCGTCCAGCGATTACCGTTCGTTTAACGTCGGCCTGGGGAAAAA
CCTGGGTTATCTGGGGGCCGTTTCCGCGGATATCACTCAGGCAAACGCCACCCTGCCCGATGACACCCGGCACCAGGGGC
AGTCCCTGCGCTTTCTTTACAGCAAGTCGCTTAACGACACGGGAACCAATCTCCAGCTGGTTGGATACCGTTATTCAACG
CAGGGTTTCTACACCCTGGCGGATACCGCCTGGCACCGTATGAGCGGCTACACGGTGGTCAGTGAAGATGGCATCGTCAA
CGTAAAGCCGAAATTCACGGATTACTACAATCTCAACTACAGCAAACGTGGCCGTCTTCAGGCTACGGTGACGCAACAGG
TCGGACGGTCATCGACCATCTATCTCACCGGCAGCCACCAGAGCTACTGGAACACCGGGCGTGCGGACGAGCAGCTGCAG
ATTGGCTATAACAGCACGATAACGGATATCAGCTGGGGCCTGAGCTACAGCCTGTCCAAAAATGCCTGGAGTGATGATAA
GGACCAGCTGCTGGCGTTCAATATTAATATACCGTTCAGCCACTGGATGCGTTCGGATACCCGTTCGGCATTTAAAAACG
CCAGTGCAAGCTACAACACATCAACCGACTTCAGAGGACGTACGGCGGGTACTGCCGGGCTTTACGGTACCCTGCTTGAA
GATAACAACCTCAGTTACAGCGTGCAAACGGGGTACGCCAGCGGCGGGTCGGGGACATCGGGGGGAACCGGCAATGCGGG
GCTTAACTATCGTGGCACCTACGGTAACAGCAACATCGGCTACAGCCACAGCGGCGACTACCGCCAGTTGTATTACGGTG
TCAGCGGCGGCGTGCTGGCGCATGAAAATGGCGTGACCTTCAGTCAGCCTCTCAACGACACCTCGGTGTTGATAAAAGCG
CCGGGAGCGGGACACGTTGGCGTTGAGAATCAGACCGGCGTGCGCACCGACTGGCGGGGTTACGCGGTACTGCCTTATGC
CATGGATTATCGCGAAAACCGTGTCGCTCTTAATACCGACTCTCTGGCCAATAATGTCGAGCTGGAAGAAGCGGTAGTGA
GCGTGGTGCCGACACGCGGCGCCGTGGTGCGCGCGGAGTTTAAGGCGCGTGTCGGGATGAAAGTCCTGATGACGCTGACC
CGGGACGGGAAACCCGTTCCCTTTGGCTCCATCGTATCCTACGAGGCCGGGCAGTCGGGAAGCATTGTTGCAGATGGCGG
GCAGGTTTATCTGACAGGACTGTCACCCGCAGGAAAAATCAAGGTTAAGTGGGGCGAGAGCGCAAATGAAAGCTGTACGG
CAACATACAGCCTGCCCGCCGACAGCCAGAACAGGGCGCTGAGCTATTCCTCAGCCGTATGCCGGTAA

Upstream 100 bases:

>100_bases
TGCAGTAATCATTTTCAAGTATTCCGTTACGGGATAATCAGTTTTGGACCATGCAGGTAAATAGAAGGCCGGCATCACGT
ATTAGAGTGCGGGAGGGACC

Downstream 100 bases:

>100_bases
TGATGCAGGGGACATACATCCATGACTAGATACGTTTCAATCCTGTGTTTACTGTCTGTTTTCGCCGGGAATACCCATGC
GGCGGACAGTACCATCACCA

Product: outer membrane usher protein, FimD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>875_residues
MSYLDYGAGSDKMTTLDTRGKTLKRTMLTPLAMLLVASTFSARADNYFNPRFLSDDPESVADLSGFEKGLEAPPGTYRVD
IYMNDGYMSTRDVTFEYSTDGKRLEPCLTRSQLATLGVNTLTLPDIAVMKSTACVPFTRLIADSSSSFDVGRQRLNISVP
QAFMGNQARGYIAPELWDNGITAGLLNYNYTGSEVRSQNGGTRNYSYLNLQSGLNVGAWRLRDNSTWSYSSGAASNENRW
QHVNTWLERDITAWRSRLTVGDSYTAGDIFEGINFRGIQVASDDNMLPDSQRGFAPVIHGIARGTARVSIKQNGYEIYQT
TVPPGAFTIGDLYAAGNSGDLQVTVKEADGSVQVFTVPFSSVPMLQREGQVKFAATAGQYRSGNGMQDKPTFFQGTSLWG
LPDGWTVYGGTRASSDYRSFNVGLGKNLGYLGAVSADITQANATLPDDTRHQGQSLRFLYSKSLNDTGTNLQLVGYRYST
QGFYTLADTAWHRMSGYTVVSEDGIVNVKPKFTDYYNLNYSKRGRLQATVTQQVGRSSTIYLTGSHQSYWNTGRADEQLQ
IGYNSTITDISWGLSYSLSKNAWSDDKDQLLAFNINIPFSHWMRSDTRSAFKNASASYNTSTDFRGRTAGTAGLYGTLLE
DNNLSYSVQTGYASGGSGTSGGTGNAGLNYRGTYGNSNIGYSHSGDYRQLYYGVSGGVLAHENGVTFSQPLNDTSVLIKA
PGAGHVGVENQTGVRTDWRGYAVLPYAMDYRENRVALNTDSLANNVELEEAVVSVVPTRGAVVRAEFKARVGMKVLMTLT
RDGKPVPFGSIVSYEAGQSGSIVADGGQVYLTGLSPAGKIKVKWGESANESCTATYSLPADSQNRALSYSSAVCR

Sequences:
NA

Specific function: NA

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA