| Definition | Erwinia tasmaniensis Et1/99, complete genome. |
|---|---|
| Accession | NC_010694 |
| Length | 3,883,467 |
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The map label for this gene is yncD
Identifier: 188534513
GI number:
Start: 2693396
End: 2695582
Strand: Reverse
Name: yncD
Synonym: ETA_23860
Alternate gene names: NA
Gene position: NA
Preceding gene: 188534515
Following gene: 188534512
Centisome position: NA
GC content: NA
Gene sequence:
>2187_bases ATGCCGGATAAGCTTTTTTGGGGTGCTAATCAGACTTATCGAATCATCTCTGTGAATAATAAAATCTTAAGTTTATTTCT GACGTTTTTTTCGCTAGCACCTGCTGCTGTCAGCCATGCACAAGCCCATTCGGCCAGCGGTCAGGAACCGTCCCTGATGG TGATAAAACAACGTGACGGATTGTCCGAGCTGGACACGCCTGCTGCGGTCAGCGTGGTGGACGGCGACGAGCTGCGCCGT GCCAGCGCGCAGGTGAATCTCTCTGAAAATCTGGGCAGCGTTCCGGGGCTGCAAATTCAGGATCGCCAGAACTACGCGCA GGATCTGCAGCTGTCGGTGCGCGGTTTTGGCAGTCGTGCGATGTACGGGGTACGCGGCGTGCGGCTGTATGTTGATGGCA TCCCCGCGACGATGCCGGACGGTCAGGGGCAGACGTCAAATATTGATATCAATTCGCTGGGTAGGGTGGAAGTACTGCGT GGGCCTTATTCCGCGCTATACGGCAATGCCTCCGGCGGCGTGGTCAATATTGATACCCTTTCTGGCAGCCAGCCCACCAC GCTGGAAGCGGGGACGTATTTTGGCAGCTACGGTTCGTGGCGTAACAGCATAAAAGCCAGCGGTGCAACCGGCGACGGCA GCCAGGCCGGAGACGTTAATTACACCCTGTCCGGATCGCGTTTTACCACCCACGGCTATCGCGACCACAGCGGCACCCAG AAAAGCCTCGGTAATGGCAAACTTGGCGTAAGGCTGGATGATGTCAGTACCCTGACGCTGATGTTTAACAGCGTATCGGT CGATGCCAACGATCCCGGCGGACTGACAGCAGAAGAGTACCGGGCCAATCCTCGCCAGTCACCGCGTGGCGATGCGTTTA ATACGCGTAAAAGCCTCGATCAAACGCAGCTGGGTTTGCGCTATCAGCGCGAGTTCAGCGACAGCGATCGGCTGACGCTG ACCACCTGGCACGGCGAGCGCCACACTACCCAGTATCAGTCGATTCCGCAGGGGCCGCAGCTCAACCCGGCCTATCCGGG GGGCGTTATTGTACTGGAGCGCAAATATCAGGGCATTGATACCCGCTGGCAGCATGATGGCCAGCTGGGCGCAGTACCTG TGACGCTGATCGGCGGGGTTGACTATGAAACCATGACCGAGCGCCGCCAGGGTTTCCAGAACTACAATCTGGTGGGCGGC GTTCCGGCGTTCGGTGAGAAAGGGGCACAGCGGCGCAATGAAAAAAATACCATGTGGAATCTGGACCCTTATGTGCAGAC CAGCTGGCGGTTAACGCCGCAATGGACGCTGGACGCCGGGCTGCGCTACAGCACCGTCAGTTTTGATTCCACCGACTACT ACATCACGACGGGCAACGGCGACGACAGCGGCAGCGCGCGCTACCACAAGCTGCTGCCGATGGGCTCACTAAGTTATGCG GTCAGCGACGCGTGGAATGTTTATCTCTCCGCCGGTCGCGGCTTCGAAACGCCAACGATCAACGAACTGTCCTATCGTTC AATTAACGGCAGCGTTACCGGACTGAACCTCGGATTGAAACCGGCCACCAGCGATACGATAGAACTGGGCAGCAAAACCC GCATTGGCTATGGCCTGCTTACCGCTGCCGTGTTCCAGACCGATACCGATAACGAGCTGGTGGTGGACCAGAGTCAGTTC GGCCGCAGCGTATACAAAAACGCCGGGGAAACGCGCCGTCGTGGCCTGGAACTGGGCTTTGACCAGCAGTTTGCCACGGA CTGGCGTGTGAAGCTGGCCTGGACGCTGCTGGACGCCACCTATCGCAACGAAACCTGTAATGCGAAAAACGTGTGTACCC CAGCGGGTAACCGCCTGCCGGGTATTGCGCGCAATATGGGCTATGCTTCACTGCAATATGCGCCGGAAAGCGGCTGGCAC GCCGGGGCGGATATTCGCTATATGAGCAACATTCAGGCCAACGACGCCAATGACGCTCAGGCCCCGTCTTATGCTGTAGC CAGCCTCAATGGCGGCTACCGCTTTAACTGGCAGCACTGGTCGCTGGATCTGTTCAGTCGCGTCGATAACCTGTTCGACC GCCAGTACATCGGCTCTGTGATCGTTAATGAAGGCAATAAGCGCTACTACGAACCGGCACCGGGGCGTAACTGGGGCGGC GGTGCCAACATAAGCTATCAGTTTTAA
Upstream 100 bases:
>100_bases ATAAATATGGTGTTTTTTTGTGCAAGATGTTGCATTGGTTATATACTTTTTTGCAGCTTTGCCGGTGGATCTCAGGGAAA GAGGGGAGCTTATTTAGGCG
Downstream 100 bases:
>100_bases ATTTTCGCCGGGGCAGCCCGGCAACAAATCCAGCAGGTGCCTGCCAGGGACGCCTGCTTCAGTACCGTAATTACAATACT GGATGGATAAGTAAGCATAC
Product: outer membrane receptor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>728_residues MPDKLFWGANQTYRIISVNNKILSLFLTFFSLAPAAVSHAQAHSASGQEPSLMVIKQRDGLSELDTPAAVSVVDGDELRR ASAQVNLSENLGSVPGLQIQDRQNYAQDLQLSVRGFGSRAMYGVRGVRLYVDGIPATMPDGQGQTSNIDINSLGRVEVLR GPYSALYGNASGGVVNIDTLSGSQPTTLEAGTYFGSYGSWRNSIKASGATGDGSQAGDVNYTLSGSRFTTHGYRDHSGTQ KSLGNGKLGVRLDDVSTLTLMFNSVSVDANDPGGLTAEEYRANPRQSPRGDAFNTRKSLDQTQLGLRYQREFSDSDRLTL TTWHGERHTTQYQSIPQGPQLNPAYPGGVIVLERKYQGIDTRWQHDGQLGAVPVTLIGGVDYETMTERRQGFQNYNLVGG VPAFGEKGAQRRNEKNTMWNLDPYVQTSWRLTPQWTLDAGLRYSTVSFDSTDYYITTGNGDDSGSARYHKLLPMGSLSYA VSDAWNVYLSAGRGFETPTINELSYRSINGSVTGLNLGLKPATSDTIELGSKTRIGYGLLTAAVFQTDTDNELVVDQSQF GRSVYKNAGETRRRGLELGFDQQFATDWRVKLAWTLLDATYRNETCNAKNVCTPAGNRLPGIARNMGYASLQYAPESGWH AGADIRYMSNIQANDANDAQAPSYAVASLNGGYRFNWQHWSLDLFSRVDNLFDRQYIGSVIVNEGNKRYYEPAPGRNWGG GANISYQF
Sequences:
NA
Specific function: NA
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA