Click here to switch to the map view.

The map label for this gene is metQ [H]

Identifier: 188528356

GI number: 188528356

Start: 1588915

End: 1589730

Strand: Direct

Name: metQ [H]

Synonym: HPSH_08150

Alternate gene names: 188528356

Gene position: 1588915-1589730 (Clockwise)

Preceding gene: 188528355

Following gene: 188528366

Centisome position: 98.78

GC content: 40.93

Gene sequence:

>816_bases
ATGAATATATTCAAGCGTATTATTAGTGTAGGGGTAATTGCTTTAGGTTTGTTTAATCTTTTAGACGCCAAACACCACAA
AGAAAAAAAAGAAAAGCATGAAATCACTCGTGAGCTTAAAGTGGGCGCTAATCCTGTGCCGCATGCGCAAATCTTGCAAT
CAGTCGTGGATGATTTGAAGGAGAAAGGGATCAAATTAGTGATCGTGTCTTTTACGGATTATGTGTTGCCTAATTTGGCG
CTCAATGACGGCTCTTTAGACGCGAATTACTTCCAGCATCGCCCTTATTTGGATCGGTTTAATTTGGACAGAAAAATGCA
CCTCATCGGTTTGGCCAATATCCATGTGGAGCCTTTGAGATTTTATTCTCAAAAAATCACGGACATTAAAAACCTTAAAA
AAGGATCAGTGATTGCTGTGCCAAACGATCCGAGCAATCAAGGCAGGGCGTTGATTTTACTGCATAAACAAGGGATTATC
GCTCTCAAAGACCCAAGCAATCTATACGCTACGGAGTTTGATATTGTCAAAAATCCTTACAATATCAAAATCAAGCCTTT
AGAAGCCGCATTGTTGCCTAAAGTTTTAGGGGATGTGGATGGGGCTATTGTAACAGGGAATTATGCCTTGCAAGCAAAAC
TCACCGGAGCCTTATTTTCAGAAGACAAGGACTCGCCTTATGCCAATCTAATAGCCGCTCGTGAGGATAACGCGCAAGAT
GAAGCCATAAAAGCGCTGATTGAAGCCTTACAGAGTGAAAAGACCAGGAAATTTATTTTGGATACCTATAAAGGGGCGAT
TATCCCGGCTTTTTAA

Upstream 100 bases:

>100_bases
GTTGAATCCTTTTCTTTTTATTCTTTGCCAATTTCTAAAATTTTCGTATCGTTTTATCTTTTTGTCGTTTTTGAATTAAT
TTTTTAATAAAGGGTTTTTT

Downstream 100 bases:

>100_bases
ACGCAAAAACGCCTCTTTATCTTAGGATAAAGGGCGTTCATTCCCATAAAAATCTTGTGTGAGCCAGTTACAATTGGTTA
AGATAGCCAAGCTCATAGAG

Product: outer membrane protein

Products: NA

Alternate protein names: Outer membrane lipoprotein 1 [H]

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNIFKRIISVGVIALGLFNLLDAKHHKEKKEKHEITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA
LNDGSLDANYFQHRPYLDRFNLDRKMHLIGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPSNQGRALILLHKQGII
ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD
EAIKALIEALQSEKTRKFILDTYKGAIIPAF

Sequences:

>Translated_271_residues
MNIFKRIISVGVIALGLFNLLDAKHHKEKKEKHEITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA
LNDGSLDANYFQHRPYLDRFNLDRKMHLIGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPSNQGRALILLHKQGII
ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD
EAIKALIEALQSEKTRKFILDTYKGAIIPAF
>Mature_271_residues
MNIFKRIISVGVIALGLFNLLDAKHHKEKKEKHEITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA
LNDGSLDANYFQHRPYLDRFNLDRKMHLIGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPSNQGRALILLHKQGII
ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD
EAIKALIEALQSEKTRKFILDTYKGAIIPAF

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=273, Percent_Identity=40.6593406593407, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1790093, Length=218, Percent_Identity=41.743119266055, Blast_Score=172, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 30194; Mature: 30194

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFKRIISVGVIALGLFNLLDAKHHKEKKEKHEITRELKVGANPVPHAQILQSVVDDLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
EKGIKLVIVSFTDYVLPNLALNDGSLDANYFQHRPYLDRFNLDRKMHLIGLANIHVEPLR
HCCEEEEEEEEHHHHCCCCEECCCCCCCHHHHCCCCHHHCCCCCEEEEEEEECCCCHHHH
FYSQKITDIKNLKKGSVIAVPNDPSNQGRALILLHKQGIIALKDPSNLYATEFDIVKNPY
HHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEHHEECCCC
NIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD
EEEEEEHHHHHHHHHHCCCCCEEEECCEEEEEEECHHHHCCCCCCCHHHEEEECCCCCHH
EAIKALIEALQSEKTRKFILDTYKGAIIPAF
HHHHHHHHHHHCCCHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MNIFKRIISVGVIALGLFNLLDAKHHKEKKEKHEITRELKVGANPVPHAQILQSVVDDLK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
EKGIKLVIVSFTDYVLPNLALNDGSLDANYFQHRPYLDRFNLDRKMHLIGLANIHVEPLR
HCCEEEEEEEEHHHHCCCCEECCCCCCCHHHHCCCCHHHCCCCCEEEEEEEECCCCHHHH
FYSQKITDIKNLKKGSVIAVPNDPSNQGRALILLHKQGIIALKDPSNLYATEFDIVKNPY
HHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCEEEEECCCCCEEEEHHEECCCC
NIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD
EEEEEEHHHHHHHHHHCCCCCEEEECCEEEEEEECHHHHCCCCCCCHHHEEEECCCCCHH
EAIKALIEALQSEKTRKFILDTYKGAIIPAF
HHHHHHHHHHHCCCHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]