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The map label for this gene is yajC

Identifier: 188528334

GI number: 188528334

Start: 1564738

End: 1565031

Strand: Direct

Name: yajC

Synonym: HPSH_08030

Alternate gene names: 188528334

Gene position: 1564738-1565031 (Clockwise)

Preceding gene: 188528333

Following gene: 188528335

Centisome position: 97.28

GC content: 40.14

Gene sequence:

>294_bases
ATGGGACAAACTAAAGACATTCTAACGACGCTTTTACCCCTTGTGGTGCTGTTTCTTATTTTTTATTTTTTGATTGTTCG
CCCGCAACGCCAGCAACAAAAAAAGCACAAAGAAATGATAGAGGGCTTGACTAAGGGCGATAAAGTTGTCACTCAAGGCG
GGTTGATCGTTGAGGTGCTTAAAGCGGAAGCGAATTTTTTTAGCGTGAAACTCAATGATGACACCACCGCTAAACTTTCT
AAAAACTATATAGCGTTCAAATTAGACGAAGAAGCGGCGCAAAATAACAACTAA

Upstream 100 bases:

>100_bases
TAGGGGCTTTGTATTTATTTTTATTAAACCAAAGAGCGGCTTTAAAGAAATAGTTAAAAATGCTATAATTTGAGATTAAA
ACATCTTTTAAGGGAATTAA

Downstream 100 bases:

>100_bases
TGAAACTTTTTAACCCTCGCTTAATCGTTTTTATTTGCGCGCTTCTTTTAGGGGTAGGGTTTTCTGTGCCTTCTTTGCTA
GAGACTAAAGGCCCTAAAAT

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MGQTKDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKVVTQGGLIVEVLKAEANFFSVKLNDDTTAKLS
KNYIAFKLDEEAAQNNN

Sequences:

>Translated_97_residues
MGQTKDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKVVTQGGLIVEVLKAEANFFSVKLNDDTTAKLS
KNYIAFKLDEEAAQNNN
>Mature_96_residues
GQTKDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKVVTQGGLIVEVLKAEANFFSVKLNDDTTAKLSK
NYIAFKLDEEAAQNNN

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=79, Percent_Identity=41.7721518987342, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 11012; Mature: 10881

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTKDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKVVTQGGLIVEVL
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
KAEANFFSVKLNDDTTAKLSKNYIAFKLDEEAAQNNN
HCCCCEEEEEECCCCCHHHCCCEEEEEECCHHCCCCC
>Mature Secondary Structure 
GQTKDILTTLLPLVVLFLIFYFLIVRPQRQQQKKHKEMIEGLTKGDKVVTQGGLIVEVL
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
KAEANFFSVKLNDDTTAKLSKNYIAFKLDEEAAQNNN
HCCCCEEEEEECCCCCHHHCCCEEEEEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]