Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528331

Identifier: 188528331

GI number: 188528331

Start: 1560343

End: 1560429

Strand: Direct

Name: 188528331

Synonym: HPSH_08015

Alternate gene names: NA

Gene position: 1560343-1560429 (Clockwise)

Preceding gene: 188528327

Following gene: 188528332

Centisome position: 97.0

GC content: 32.18

Gene sequence:

>87_bases
ATGTGTGAATTTGACGCTGTCTTTGCCTTTGATTCCTATAAAATGATAGAAAAACGACAAAACCCTATGATTATAGCAAA
AGATTAG

Upstream 100 bases:

>100_bases
GTTACCATGAGAATATTCTCCTTAAAGTTATTTTGGTTCTCTTCCTCCATGCTCATTTGATTCTTAAATTTCTTAAGAAC
ACCTAAATACAAGGATTAGC

Downstream 100 bases:

>100_bases
GGTTTTTTAGCTTAAGCAAAAAAGGCTTTTAGGTTATAATAAAGGCAAAATAGAATTTTAGGATAGATCTAATGGATACA
AAAAGACAATGCATGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 28; Mature: 28

Protein sequence:

>28_residues
MCEFDAVFAFDSYKMIEKRQNPMIIAKD

Sequences:

>Translated_28_residues
MCEFDAVFAFDSYKMIEKRQNPMIIAKD
>Mature_28_residues
MCEFDAVFAFDSYKMIEKRQNPMIIAKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3342; Mature: 3342

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
10.7 %Met     (Translated Protein)
14.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
10.7 %Met     (Mature Protein)
14.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCEFDAVFAFDSYKMIEKRQNPMIIAKD
CCCCCEEEEECCCHHHHCCCCCEEEEEC
>Mature Secondary Structure
MCEFDAVFAFDSYKMIEKRQNPMIIAKD
CCCCCEEEEECCCHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA