| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188528300
Identifier: 188528300
GI number: 188528300
Start: 1528725
End: 1529312
Strand: Direct
Name: 188528300
Synonym: HPSH_07860
Alternate gene names: NA
Gene position: 1528725-1529312 (Clockwise)
Preceding gene: 188528298
Following gene: 188528301
Centisome position: 95.04
GC content: 37.07
Gene sequence:
>588_bases ATGCTTACTCATAATAACCTAATAGATGCGAAAAAAAGGATTTTCATGTTGCTTTGCGCTGGAAGGAATGAAACTTTAAA GGGAGCGATTCCTATTGGTGTGGGTTTGATAGAAAGTGCGATTAATTTAACGAGAATGTGCCTAAAAAACCCTGATACAG AAAGCCTTATTTTTATAGGGAGCGCGGGGAGTTATAGCCCAGAAATTGAGCTTTTAAGCGTGTTTGAAAGCGTTTGTGGC TATCAAGTTGAAGAGAGTTTTAGCCATTTAAACAGCTACACGCCTTTGGATAATTCCATTCAAATAGAAACCAAAGAGGA AGCTCTTTTTAAAAGGGTGTGCGTCAATAGCAGTAACTATATCCACACCAGCGAAATATTTGCTAAAAAAATGGCTCAAA AGGGCGTTTTATTAGAAAACATGGAGTTTTTTAGCATCTTAAGCGTGGCTAAGGCGTTTTCTTTAAAGGCTAAAGGGATT TTTTGCGTGAGCAACCATGCAGGGCTTAATGCGCATAAGGAATTTAAAGAAAACCACGCTAAAGTCAAACAAATTTTAGA AAACACCATTGATAGTTTAATACTTTAG
Upstream 100 bases:
>100_bases TTATAGCGTGAATAAGTTGTGAATGAAAAAGGAATAACATGTGAATGAAATGTGAATGAAACCTTAAAATTAAGGTGTTT CTTTTAAGGGTTTGTCTATA
Downstream 100 bases:
>100_bases CTATCATGGAGCATTCTAAAATTAAAGGCGGTTGAATGTTTGAAAAAATACGCAAGATTTTAGCGGAGATTGAAGACTCG CAAAATGAAATTGAAATGCT
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Purine Or Other Phosphorylase Family 1 Protein; Bacterioferritin Comigratory Protein Bcp
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLTHNNLIDAKKRIFMLLCAGRNETLKGAIPIGVGLIESAINLTRMCLKNPDTESLIFIGSAGSYSPEIELLSVFESVCG YQVEESFSHLNSYTPLDNSIQIETKEEALFKRVCVNSSNYIHTSEIFAKKMAQKGVLLENMEFFSILSVAKAFSLKAKGI FCVSNHAGLNAHKEFKENHAKVKQILENTIDSLIL
Sequences:
>Translated_195_residues MLTHNNLIDAKKRIFMLLCAGRNETLKGAIPIGVGLIESAINLTRMCLKNPDTESLIFIGSAGSYSPEIELLSVFESVCG YQVEESFSHLNSYTPLDNSIQIETKEEALFKRVCVNSSNYIHTSEIFAKKMAQKGVLLENMEFFSILSVAKAFSLKAKGI FCVSNHAGLNAHKEFKENHAKVKQILENTIDSLIL >Mature_195_residues MLTHNNLIDAKKRIFMLLCAGRNETLKGAIPIGVGLIESAINLTRMCLKNPDTESLIFIGSAGSYSPEIELLSVFESVCG YQVEESFSHLNSYTPLDNSIQIETKEEALFKRVCVNSSNYIHTSEIFAKKMAQKGVLLENMEFFSILSVAKAFSLKAKGI FCVSNHAGLNAHKEFKENHAKVKQILENTIDSLIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21660; Mature: 21660
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTHNNLIDAKKRIFMLLCAGRNETLKGAIPIGVGLIESAINLTRMCLKNPDTESLIFIG CCCCCCHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE SAGSYSPEIELLSVFESVCGYQVEESFSHLNSYTPLDNSIQIETKEEALFKRVCVNSSNY CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCC IHTSEIFAKKMAQKGVLLENMEFFSILSVAKAFSLKAKGIFCVSNHAGLNAHKEFKENHA EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH KVKQILENTIDSLIL HHHHHHHHHHHHHCC >Mature Secondary Structure MLTHNNLIDAKKRIFMLLCAGRNETLKGAIPIGVGLIESAINLTRMCLKNPDTESLIFIG CCCCCCHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE SAGSYSPEIELLSVFESVCGYQVEESFSHLNSYTPLDNSIQIETKEEALFKRVCVNSSNY CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCC IHTSEIFAKKMAQKGVLLENMEFFSILSVAKAFSLKAKGIFCVSNHAGLNAHKEFKENHA EEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH KVKQILENTIDSLIL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA