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The map label for this gene is 188528296

Identifier: 188528296

GI number: 188528296

Start: 1525582

End: 1527021

Strand: Reverse

Name: 188528296

Synonym: HPSH_07840

Alternate gene names: NA

Gene position: 1527021-1525582 (Counterclockwise)

Preceding gene: 188528299

Following gene: 188528295

Centisome position: 94.93

GC content: 39.58

Gene sequence:

>1440_bases
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAAGCTAAAGTCCTTGATTCTAAAGAACCAAGAGAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ACGAACACAATGAAAGCAATGAGAATAGGGATAATGCGCAAAAACAAGCCGTTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCCAGAGCACGAAAAGACGGCACGACTAGGCAATGTTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTCTATGAAACTAGCGAACTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Upstream 100 bases:

>100_bases
ATTATTAATCAAAGTGTTACCTATCTATAACCTATTTATAACTTTTATTAAACCTCTTTTTAAGCTATAATTCAAAAATT
CAAAATAAAAAGGAATCAAC

Downstream 100 bases:

>100_bases
GATGGTGGCTTGAGGCGGAATCGAACCACCGACACGAAGATTTTCAGTCTTCTGCTCTACCGACTGAGCTATCAAGCCAA
GCAAAAGATAATTATTACAT

Product: periplasmic competence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPREVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQSLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAVRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Sequences:

>Translated_479_residues
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPREVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQSLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAVRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
>Mature_479_residues
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPREVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQSLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAVRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54984; Mature: 54984

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPREVLGVYNISPHK
CCCCEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHEEECCCCCC
KLTLTITHISTAIVYQPLDEKLSLETTLSPNRPTIPRNTQIVFSSKELKELHPHQMPSLN
EEEEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCC
APIQKPQNKPTPSQQSLQNFSYPESKLDSKNPKNSLLQPLATLNKTSLANEVKTPTNDTK
CCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAVRDPNIKEFA
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHC
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTE
CCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEEEECCC
PLEEPQTFEAKNNFTILQARSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQ
CCCCCCCEECCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHH
LVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNELNLNEKFMEFVEVYEGHYLND
HHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
IVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
HHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCEEEEEECCCCHHCCC
>Mature Secondary Structure
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPREVLGVYNISPHK
CCCCEEEHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHEEECCCCCC
KLTLTITHISTAIVYQPLDEKLSLETTLSPNRPTIPRNTQIVFSSKELKELHPHQMPSLN
EEEEEEEECCEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCC
APIQKPQNKPTPSQQSLQNFSYPESKLDSKNPKNSLLQPLATLNKTSLANEVKTPTNDTK
CCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PPLKHSSQDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAQKQAVRDPNIKEFA
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHC
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTE
CCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCEEEEEEECCC
PLEEPQTFEAKNNFTILQARSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQ
CCCCCCCEECCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHH
LVKAIYERPKQDDQIEPTFYETSELAYSSTRKSEITRNELNLNEKFMEFVEVYEGHYLND
HHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
IVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV
HHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCEEEEEECCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA