Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528207

Identifier: 188528207

GI number: 188528207

Start: 1429816

End: 1430352

Strand: Direct

Name: 188528207

Synonym: HPSH_07355

Alternate gene names: NA

Gene position: 1429816-1430352 (Clockwise)

Preceding gene: 188528206

Following gene: 188528208

Centisome position: 88.89

GC content: 34.82

Gene sequence:

>537_bases
ATGATCATCTACTATCAAAACAGATATGGTGAAGGGTATGATCAAAGAGAAAAACGCCCATACTTTGTTATTTATGAAAA
CAAGGACTTTTTCTTAGCATTCCCACAAACAACAAAAAAGAAACAAGGCAAAAAATACCCTTCACATAAAAACTACATTA
TAAATGAAGAAAATGAGATAACGATTGATCAGTTACAAGTTGTCCCAAAAGCGCAAGTTTTAGAGAATAATATGGCAAGA
AGTCTTGCATTAGCGTTACAAAAAGCGTCTATCCCTAAACCCGCATCAACGCATAGAGCCCCACTCATCAATCATTTTTT
AGAACAAGTTATTTTACAAAGCCCATCTGATAAAAACAAAAATATAAAACCAATTGCTTTTGGAAGTATTATCAAACTCA
ACCCACACAATAGAAATCCCTTATTAAAACCCTACAGCGCATTTATTGCGCTTTCTTGCGCTCAATTCCATTATTCAGGC
ATGCGCCTAGTGGCCCCCTATGAAAACGATTCTATGATTTTTGAGTTATTGCATTGA

Upstream 100 bases:

>100_bases
GGAGTGTGAGTTTAGGTATAAGGAAAACCTGTATCAAATTCTGTTAAGATTGATTAGAAAAAATTTGATTGAGTTATTTT
GACCCAAAGGAGATATGAGC

Downstream 100 bases:

>100_bases
TTTTCAAGCGCGCAATTTTGAACGCCAACCACTTGTTCAACTAGATCCCAAAGAAATTAAAACCCAAATCCTTGAGCATT
TAAAACTCTAAAAATAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MIIYYQNRYGEGYDQREKRPYFVIYENKDFFLAFPQTTKKKQGKKYPSHKNYIINEENEITIDQLQVVPKAQVLENNMAR
SLALALQKASIPKPASTHRAPLINHFLEQVILQSPSDKNKNIKPIAFGSIIKLNPHNRNPLLKPYSAFIALSCAQFHYSG
MRLVAPYENDSMIFELLH

Sequences:

>Translated_178_residues
MIIYYQNRYGEGYDQREKRPYFVIYENKDFFLAFPQTTKKKQGKKYPSHKNYIINEENEITIDQLQVVPKAQVLENNMAR
SLALALQKASIPKPASTHRAPLINHFLEQVILQSPSDKNKNIKPIAFGSIIKLNPHNRNPLLKPYSAFIALSCAQFHYSG
MRLVAPYENDSMIFELLH
>Mature_178_residues
MIIYYQNRYGEGYDQREKRPYFVIYENKDFFLAFPQTTKKKQGKKYPSHKNYIINEENEITIDQLQVVPKAQVLENNMAR
SLALALQKASIPKPASTHRAPLINHFLEQVILQSPSDKNKNIKPIAFGSIIKLNPHNRNPLLKPYSAFIALSCAQFHYSG
MRLVAPYENDSMIFELLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20656; Mature: 20656

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIYYQNRYGEGYDQREKRPYFVIYENKDFFLAFPQTTKKKQGKKYPSHKNYIINEENEI
CEEEEECCCCCCCCHHCCCCEEEEEECCCEEEECCCCCCHHCCCCCCCCCCEEECCCCCE
TIDQLQVVPKAQVLENNMARSLALALQKASIPKPASTHRAPLINHFLEQVILQSPSDKNK
EHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
NIKPIAFGSIIKLNPHNRNPLLKPYSAFIALSCAQFHYSGMRLVAPYENDSMIFELLH
CCCEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECC
>Mature Secondary Structure
MIIYYQNRYGEGYDQREKRPYFVIYENKDFFLAFPQTTKKKQGKKYPSHKNYIINEENEI
CEEEEECCCCCCCCHHCCCCEEEEEECCCEEEECCCCCCHHCCCCCCCCCCEEECCCCCE
TIDQLQVVPKAQVLENNMARSLALALQKASIPKPASTHRAPLINHFLEQVILQSPSDKNK
EHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
NIKPIAFGSIIKLNPHNRNPLLKPYSAFIALSCAQFHYSGMRLVAPYENDSMIFELLH
CCCEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA