Click here to switch to the map view.

The map label for this gene is 188528178

Identifier: 188528178

GI number: 188528178

Start: 1404799

End: 1405491

Strand: Reverse

Name: 188528178

Synonym: HPSH_07195

Alternate gene names: NA

Gene position: 1405491-1404799 (Counterclockwise)

Preceding gene: 188528179

Following gene: 188528177

Centisome position: 87.38

GC content: 33.91

Gene sequence:

>693_bases
ATGGCGTATTCAAAAATCAAAGCTTTTAATAGCAAGTTTAAAGAAAATGAAAAGAAAGGTCTTGTAATTTGTGGGTTGCA
ATTTGGAACTGATGGAGATAAAAAGCCACATAAAATCGCTAATTTGTTAGATGATTATAAAGGCAAAAAGCATTGCTTCT
CTAATTTTGTCAATTATCCTAGCAAAGATGATTTTGCTTTTCAAAAACGCATTACTAAATTTTTTGGTTTATGGGATTGT
TGCTTGGAAACAGACTTTGATAAAGTGGGGGCGTTTGAAAGAAGTCTTATAGGGATAAACTGGCTTAGCAACGGAGCAGA
CAGCATGGATAACGAAAACTGTCATTCATTTTTTCAAGCAGAACACAAAGAAAGCTTTTTGCATCATTTGGAAGTCCTAG
AGCCTAAATTGTTATTCTTCTTTGGGATTGATATGCTAAGGGCTTTAAATGATGAAAGAATTAAACCTTATGCTGAAAAT
TTTCTAGGTAAGGCTAAAAATGAGCCAAATTATATCACTAAGCCTTTTGAAGGCAAGTCTTTTAGGGTAGGGTTTCAAAG
TTTTGAAAAATGCGAAGTTGTAGCTTTCCCACACCCTACAGGCACGATAGGGCTAAGTGATGAATACATTGCTCTTTTTA
AAGATGAAATTAAACCTTTAATTGAAAATTACAGAAAGTCTAAGGGTGTGTGA

Upstream 100 bases:

>100_bases
CCACTCAATTTTTCAAATTTCGCATTTAATTTTTTCAACCCCATATTTTAGGCGTTTTCTATATACATGTGGGGTTAATA
AAGTTAAAAAAAGGACAAAA

Downstream 100 bases:

>100_bases
GTTAAAAAGGGAGTCAAAAAATGAGTGAGAATAAAGAAATTTTAGAAAGAATGGCTACAGCGTTAGAAACTATGGCACAA
GCAACGCAAAATTTAGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MAYSKIKAFNSKFKENEKKGLVICGLQFGTDGDKKPHKIANLLDDYKGKKHCFSNFVNYPSKDDFAFQKRITKFFGLWDC
CLETDFDKVGAFERSLIGINWLSNGADSMDNENCHSFFQAEHKESFLHHLEVLEPKLLFFFGIDMLRALNDERIKPYAEN
FLGKAKNEPNYITKPFEGKSFRVGFQSFEKCEVVAFPHPTGTIGLSDEYIALFKDEIKPLIENYRKSKGV

Sequences:

>Translated_230_residues
MAYSKIKAFNSKFKENEKKGLVICGLQFGTDGDKKPHKIANLLDDYKGKKHCFSNFVNYPSKDDFAFQKRITKFFGLWDC
CLETDFDKVGAFERSLIGINWLSNGADSMDNENCHSFFQAEHKESFLHHLEVLEPKLLFFFGIDMLRALNDERIKPYAEN
FLGKAKNEPNYITKPFEGKSFRVGFQSFEKCEVVAFPHPTGTIGLSDEYIALFKDEIKPLIENYRKSKGV
>Mature_229_residues
AYSKIKAFNSKFKENEKKGLVICGLQFGTDGDKKPHKIANLLDDYKGKKHCFSNFVNYPSKDDFAFQKRITKFFGLWDCC
LETDFDKVGAFERSLIGINWLSNGADSMDNENCHSFFQAEHKESFLHHLEVLEPKLLFFFGIDMLRALNDERIKPYAENF
LGKAKNEPNYITKPFEGKSFRVGFQSFEKCEVVAFPHPTGTIGLSDEYIALFKDEIKPLIENYRKSKGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26516; Mature: 26385

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSKIKAFNSKFKENEKKGLVICGLQFGTDGDKKPHKIANLLDDYKGKKHCFSNFVNYP
CCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCC
SKDDFAFQKRITKFFGLWDCCLETDFDKVGAFERSLIGINWLSNGADSMDNENCHSFFQA
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
EHKESFLHHLEVLEPKLLFFFGIDMLRALNDERIKPYAENFLGKAKNEPNYITKPFEGKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCE
FRVGFQSFEKCEVVAFPHPTGTIGLSDEYIALFKDEIKPLIENYRKSKGV
EEECHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AYSKIKAFNSKFKENEKKGLVICGLQFGTDGDKKPHKIANLLDDYKGKKHCFSNFVNYP
CCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCC
SKDDFAFQKRITKFFGLWDCCLETDFDKVGAFERSLIGINWLSNGADSMDNENCHSFFQA
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
EHKESFLHHLEVLEPKLLFFFGIDMLRALNDERIKPYAENFLGKAKNEPNYITKPFEGKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCE
FRVGFQSFEKCEVVAFPHPTGTIGLSDEYIALFKDEIKPLIENYRKSKGV
EEECHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA