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The map label for this gene is 188528171

Identifier: 188528171

GI number: 188528171

Start: 1390714

End: 1391562

Strand: Reverse

Name: 188528171

Synonym: HPSH_07150

Alternate gene names: NA

Gene position: 1391562-1390714 (Counterclockwise)

Preceding gene: 188528172

Following gene: 188528166

Centisome position: 86.51

GC content: 36.4

Gene sequence:

>849_bases
ATGAAAACCTTTAAAAACTTGCTCTGTTTTAGCCTGATTGCTATGAGTTGGCTCCAAGCGGACATGCTGGATAATTTCAC
TAAGGCTATTAACAGCTACACCACTAAAAAGCTTAATGAAATCAAGGATCAAGTAAACAGCGCTAACCCCACTAAGACCT
ATGCTAATGGCATTCTCACTAACATTGATTGTAAAGTCTTAAAAAATAACTTTTATTCGGTGTGTTATTCTAGCGAGTTA
AAAAACCCTATTTATGGTGTGAGCGTGTTGTTTGGGGATTTAGTGGATAAAAATAATATTGAAAAACGCTATGAGTTTAA
AACGGACACACGATTAGCCAAATACCAACAAGCCACGACACAAGATTACACAAGAAGCGGTTTTGATAGGGGGCATTTTG
TGGCGAATGACGCTTCTTTTGATTTTGCGTCTAACCCTTTAAGAGAGACTTACAGAATGACTAATATCACCCCTGAAGCC
AAAAACACCAACAGGCATTCTGTTTTATTAGTAGAAAAAGAGGGCCGTAATTTGGCTAGGAAATACCATCAAGTTTTAGT
AGAAGAACTCACCATCATCAAACAGGGTTATAGGACTTTTAGCTCTAAAAATATCGCTATCCCTAGCGGATTTTGGTACC
ACTATGATATAAGCCTAACCGATAGCTATGAAAACGCTAAAAGCGAATGTTTTTACATCCCTAATGACAACCAAAAGTAT
CCCTTACAAAAAATGAGAAGAGATTGTAAAGAATATGAGCGGGTTGAAAAGCAAGTGGTTTTTAAGAACAATAAAAACGC
TGAGTTGAATGAATTGTCTAAGTATTTTAACAACGCTAAGAAGTATTAA

Upstream 100 bases:

>100_bases
TTAACGCATCAAAACGCTAGGCGCTAGGCTATTTAGTGGGTAAAAACAAACGATTAAAAATATTATTGTAGCATTCAAGC
CAATCAAAAAGGAGCAAAAC

Downstream 100 bases:

>100_bases
AACCGCCCTTAAAATGCCTATAAAAACACCGGTATTTTTGATAAAAAGGTTTAAGGAATCAAATCCCTAAACGGCTAAAA
TTTGTTTTTGTTGGAAGCGT

Product: putative endonuclease

Products: NA

Alternate protein names: DNA/RNA Endonuclease G; Nuclease; Endonuclease G; Minor Nuclease C1B Isoform

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKTFKNLLCFSLIAMSWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKTYANGILTNIDCKVLKNNFYSVCYSSEL
KNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKYQQATTQDYTRSGFDRGHFVANDASFDFASNPLRETYRMTNITPEA
KNTNRHSVLLVEKEGRNLARKYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPNDNQKY
PLQKMRRDCKEYERVEKQVVFKNNKNAELNELSKYFNNAKKY

Sequences:

>Translated_282_residues
MKTFKNLLCFSLIAMSWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKTYANGILTNIDCKVLKNNFYSVCYSSEL
KNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKYQQATTQDYTRSGFDRGHFVANDASFDFASNPLRETYRMTNITPEA
KNTNRHSVLLVEKEGRNLARKYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPNDNQKY
PLQKMRRDCKEYERVEKQVVFKNNKNAELNELSKYFNNAKKY
>Mature_282_residues
MKTFKNLLCFSLIAMSWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKTYANGILTNIDCKVLKNNFYSVCYSSEL
KNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKYQQATTQDYTRSGFDRGHFVANDASFDFASNPLRETYRMTNITPEA
KNTNRHSVLLVEKEGRNLARKYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPNDNQKY
PLQKMRRDCKEYERVEKQVVFKNNKNAELNELSKYFNNAKKY

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32989; Mature: 32989

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFKNLLCFSLIAMSWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKTYANGILT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEE
NIDCKVLKNNFYSVCYSSELKNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKYQQATT
CCHHHHHHCCHHHHEEHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHH
QDYTRSGFDRGHFVANDASFDFASNPLRETYRMTNITPEAKNTNRHSVLLVEKEGRNLAR
HHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHH
KYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPNDNQKY
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCC
PLQKMRRDCKEYERVEKQVVFKNNKNAELNELSKYFNNAKKY
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTFKNLLCFSLIAMSWLQADMLDNFTKAINSYTTKKLNEIKDQVNSANPTKTYANGILT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEE
NIDCKVLKNNFYSVCYSSELKNPIYGVSVLFGDLVDKNNIEKRYEFKTDTRLAKYQQATT
CCHHHHHHCCHHHHEEHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHH
QDYTRSGFDRGHFVANDASFDFASNPLRETYRMTNITPEAKNTNRHSVLLVEKEGRNLAR
HHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHH
KYHQVLVEELTIIKQGYRTFSSKNIAIPSGFWYHYDISLTDSYENAKSECFYIPNDNQKY
HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCC
PLQKMRRDCKEYERVEKQVVFKNNKNAELNELSKYFNNAKKY
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA