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The map label for this gene is exbB [H]

Identifier: 188528128

GI number: 188528128

Start: 1345665

End: 1346102

Strand: Direct

Name: exbB [H]

Synonym: HPSH_06925

Alternate gene names: 188528128

Gene position: 1345665-1346102 (Clockwise)

Preceding gene: 188528125

Following gene: 188528129

Centisome position: 83.66

GC content: 38.81

Gene sequence:

>438_bases
ATGGGCGGTTTTTCAATAGGAATGTTGAAAGATTATGTGGATATATTTGTTTTTGCGGTGCTTGGCGTGGCCAGTTTTTT
AGCTTTGTGGTTTGCGATTGAAAGGGTTATTTTTTATTCTAAAGTCAATTTGAAAGCTTATGATGATATAGATGCCCTGA
ATTTGGATTTAACCAAGAATCTAACCATTCTCTATGTGATTTATTCTAACGCGCCTTATGTGGGCTTATTAGGGACGGTT
TTAGGAATTATGGTGATTTTCTATGACATGGGCGTGAGCGGCGGGATGGACGCTAAAACGATCATGGTAGGTTTGTCTTT
AGCTTTAAAAGCGACCGCTTTAGGGCTTGCTGTGGCGATCCCTACGCTGATTGCATATAATGGCTTATTGAGAAAATCCG
ATGTTTTGAGCGAAAAATTTAGGATCATGAAAAAATGA

Upstream 100 bases:

>100_bases
GAACGAATGCTTCTTATAGAGTGCATGCTCTTAGAGTGTGGCTGTATTGCGTGTTGCTTTAATCTTAAGGGAATTATTTT
ATCATAGACAAGGAGTTTTT

Downstream 100 bases:

>100_bases
AAAGCATCAGAAGAGGCGATGGGCTGAATGTTGTCCCTTTTATTGATATTATGCTCGTTTTGCTAGCGATTGTATTAAGC
GTTTCTACTTTTATCGCGCA

Product: biopolymer transport protein (exbB)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MGGFSIGMLKDYVDIFVFAVLGVASFLALWFAIERVIFYSKVNLKAYDDIDALNLDLTKNLTILYVIYSNAPYVGLLGTV
LGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGLAVAIPTLIAYNGLLRKSDVLSEKFRIMKK

Sequences:

>Translated_145_residues
MGGFSIGMLKDYVDIFVFAVLGVASFLALWFAIERVIFYSKVNLKAYDDIDALNLDLTKNLTILYVIYSNAPYVGLLGTV
LGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGLAVAIPTLIAYNGLLRKSDVLSEKFRIMKK
>Mature_144_residues
GGFSIGMLKDYVDIFVFAVLGVASFLALWFAIERVIFYSKVNLKAYDDIDALNLDLTKNLTILYVIYSNAPYVGLLGTVL
GIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGLAVAIPTLIAYNGLLRKSDVLSEKFRIMKK

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014172 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 15803; Mature: 15672

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGFSIGMLKDYVDIFVFAVLGVASFLALWFAIERVIFYSKVNLKAYDDIDALNLDLTKN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEECCC
LTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGLAVAI
EEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PTLIAYNGLLRKSDVLSEKFRIMKK
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGFSIGMLKDYVDIFVFAVLGVASFLALWFAIERVIFYSKVNLKAYDDIDALNLDLTKN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEECCC
LTILYVIYSNAPYVGLLGTVLGIMVIFYDMGVSGGMDAKTIMVGLSLALKATALGLAVAI
EEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PTLIAYNGLLRKSDVLSEKFRIMKK
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]