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The map label for this gene is yhhG [C]

Identifier: 188528127

GI number: 188528127

Start: 1344882

End: 1345328

Strand: Reverse

Name: yhhG [C]

Synonym: HPSH_06920

Alternate gene names: 188528127

Gene position: 1345328-1344882 (Counterclockwise)

Preceding gene: 188528131

Following gene: 188528126

Centisome position: 83.64

GC content: 40.72

Gene sequence:

>447_bases
ATGGATACACCCAATAAAGACGATTCAATCATCCGCTTTTCGGTTTCTTTGCAACAAAATTTATTAGACGAATTAGACAA
CCGCATCATTAAAAACGGCTATTCTTCTCGTTCAGAATTAGTGCGCGACATGATCAGAGAAAAATTAGTAGAAGACAATT
GGGCAGAAGATAACCCTAATGATGAGAGCAAAATCGCCGTGCTTGTGGTGATTTATGATCACCACCAAAGGGAATTAAAC
CAGCGCATGATAGACATTCAGCATGCCAGCGGGACGCATGTTTTATGCACCACGCACATTCATATGGACGCGCATAATTG
TTTAGAAACGATTATTTTACAAGGCAATTCGTCTGAAATCCAACGCTTGCAATTAGAAATCGGGGGGCTTAGGGGGGTTA
AATTCGCTAAATTGACTAAGGCGTCTAGCTTTGAATGCAATGAATAG

Upstream 100 bases:

>100_bases
TTGTATTATATTTGTATTATAATTGTTAATTTTAAATCAATTCAATAATACTAGCATGAGCGACTTTTAACAGACTTATG
CCAAAAAAGGATTTTTCTCA

Downstream 100 bases:

>100_bases
CGTCTTAAGATACAAAGAATTAGCGCTCTATGGAGGGAGTTTTGATCCCTTACACAAGGCTCATTTAGCCATTATTGATC
AAACTTTAGAATTATTGCCA

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDHHQRELN
QRMIDIQHASGTHVLCTTHIHMDAHNCLETIILQGNSSEIQRLQLEIGGLRGVKFAKLTKASSFECNE

Sequences:

>Translated_148_residues
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDHHQRELN
QRMIDIQHASGTHVLCTTHIHMDAHNCLETIILQGNSSEIQRLQLEIGGLRGVKFAKLTKASSFECNE
>Mature_148_residues
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPNDESKIAVLVVIYDHHQRELN
QRMIDIQHASGTHVLCTTHIHMDAHNCLETIILQGNSSEIQRLQLEIGGLRGVKFAKLTKASSFECNE

Specific function: Transcriptional regulator (Potential) [H]

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]

Homologues:

Organism=Escherichia coli, GI1789892, Length=108, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864 [H]

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 16969; Mature: 16969

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPN
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDAHNCLETIILQGNSSEI
CCCEEEEEEEEECCHHHHHHHHHEEEECCCCCEEEEEEEEECCHHHHHHHHEECCCCHHH
QRLQLEIGGLRGVKFAKLTKASSFECNE
HHHHHHHCCCCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MDTPNKDDSIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAEDNPN
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
DESKIAVLVVIYDHHQRELNQRMIDIQHASGTHVLCTTHIHMDAHNCLETIILQGNSSEI
CCCEEEEEEEEECCHHHHHHHHHEEEECCCCCEEEEEEEEECCHHHHHHHHEECCCCHHH
QRLQLEIGGLRGVKFAKLTKASSFECNE
HHHHHHHCCCCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA