Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528075

Identifier: 188528075

GI number: 188528075

Start: 1310836

End: 1310973

Strand: Reverse

Name: 188528075

Synonym: HPSH_06660

Alternate gene names: NA

Gene position: 1310973-1310836 (Counterclockwise)

Preceding gene: 188528080

Following gene: 188528073

Centisome position: 81.5

GC content: 31.88

Gene sequence:

>138_bases
TTGGGTAAAAACGCTACTAAAGGCTTTGATGTTTTAGAGGTATTGGGCAGAAAAAAGACTATTAAGAAAAGAAAGCTGCA
AGAAACAAAAAATTGTTTCTTGCAAAAAAAGTTTATTGAGCGTAAGCTTCTAGTTTGA

Upstream 100 bases:

>100_bases
TCTCTGTATTAAGTCATATCGGCTGAAACTTCAAATAGTTTAGCATAAAAATAAAAAAGCGTCTAATATATTCAAAATAG
GCGTTCAATTTTTTAAGCGA

Downstream 100 bases:

>100_bases
TTTCAATCTTTACCTCATCCCCAACGACAGCATCGTTAAATGTTTTGCCGATACCAAAATCCTTGCGGTTGATTTTACCT
TCAGCTTGTAACACCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 44

Protein sequence:

>45_residues
MGKNATKGFDVLEVLGRKKTIKKRKLQETKNCFLQKKFIERKLLV

Sequences:

>Translated_45_residues
MGKNATKGFDVLEVLGRKKTIKKRKLQETKNCFLQKKFIERKLLV
>Mature_44_residues
GKNATKGFDVLEVLGRKKTIKKRKLQETKNCFLQKKFIERKLLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5308; Mature: 5176

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNATKGFDVLEVLGRKKTIKKRKLQETKNCFLQKKFIERKLLV
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKNATKGFDVLEVLGRKKTIKKRKLQETKNCFLQKKFIERKLLV
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA