Click here to switch to the map view.

The map label for this gene is 188528040

Identifier: 188528040

GI number: 188528040

Start: 1275074

End: 1275652

Strand: Reverse

Name: 188528040

Synonym: HPSH_06475

Alternate gene names: NA

Gene position: 1275652-1275074 (Counterclockwise)

Preceding gene: 188528041

Following gene: 188528039

Centisome position: 79.3

GC content: 39.72

Gene sequence:

>579_bases
ATGAAATATTCTTTAAAACTTTTTGTGCGGCCTTTTTTGGTGGTTTTAGGGTTCATGTTGTTGTATGCTTTAGCGCATGC
TGCGCTTGGTTTTTATGCGAAAAAAGACAGCGCTTCAATAAGCCAGAATTTAGAAAAAACCGAGATAGAGCGTCAAAACA
GCGCGCTTTTGCCTAAACAAGAAGAAGCCAACGCAACCACAACCGCTACAGAAGAAAACCCCACCAAAGATCCTCCTTTG
CCTTCAGAAACGGCCACGCAAAAACAAGAGATTAAACAAGAAACTAAACAAGAGCAAGAAAAAGAAAACGAACCCAAACA
AAACAGCGCTTCACCCACTCAAAACAATCAAAAAACCCCCACAACCCCTACAATTGGAAAAAAACCTTTAGAGTATAAGG
TCGCAGTCAGTGGCGTGAATGTGCGCGCTTTTCCTAGCACAAAAGGTAAAATCATTGGCTCGCTTGCAAAAGATAAAAGC
GTGAAGGTTTTAGAAATCCAAAACGATTGGGCTAAAATTGAATTTTCTAACGAAACAAAGGGCTATGTGTTTTTAAAACT
CTTAAAAAAGGCTGAATGA

Upstream 100 bases:

>100_bases
TTTTAGGTTTGGTAGCGAGTTTGATAAGCGATTTGCTCTGCGTGGTGATTGACCCTAGGATTGATTTTGAAAAGCGTTGA
GGGTAGGAATGAAAACTGAA

Downstream 100 bases:

>100_bases
AAGAATAATGAAATTAAAATCTTTTGGGGTTTTTGGAAATCCCATTAAACATTCCAAATCGCCCTTAATCCATAACGCTT
GTTTTTTGACTTTTCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKYSLKLFVRPFLVVLGFMLLYALAHAALGFYAKKDSASISQNLEKTEIERQNSALLPKQEEANATTTATEENPTKDPPL
PSETATQKQEIKQETKQEQEKENEPKQNSASPTQNNQKTPTTPTIGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLAKDKS
VKVLEIQNDWAKIEFSNETKGYVFLKLLKKAE

Sequences:

>Translated_192_residues
MKYSLKLFVRPFLVVLGFMLLYALAHAALGFYAKKDSASISQNLEKTEIERQNSALLPKQEEANATTTATEENPTKDPPL
PSETATQKQEIKQETKQEQEKENEPKQNSASPTQNNQKTPTTPTIGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLAKDKS
VKVLEIQNDWAKIEFSNETKGYVFLKLLKKAE
>Mature_192_residues
MKYSLKLFVRPFLVVLGFMLLYALAHAALGFYAKKDSASISQNLEKTEIERQNSALLPKQEEANATTTATEENPTKDPPL
PSETATQKQEIKQETKQEQEKENEPKQNSASPTQNNQKTPTTPTIGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLAKDKS
VKVLEIQNDWAKIEFSNETKGYVFLKLLKKAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21414; Mature: 21414

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSLKLFVRPFLVVLGFMLLYALAHAALGFYAKKDSASISQNLEKTEIERQNSALLPKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
EEANATTTATEENPTKDPPLPSETATQKQEIKQETKQEQEKENEPKQNSASPTQNNQKTP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TTPTIGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLAKDKSVKVLEIQNDWAKIEFSNETK
CCCCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHCCCCEEEEEECCCEEEEEECCCCC
GYVFLKLLKKAE
CHHHHHHHHHCC
>Mature Secondary Structure
MKYSLKLFVRPFLVVLGFMLLYALAHAALGFYAKKDSASISQNLEKTEIERQNSALLPKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
EEANATTTATEENPTKDPPLPSETATQKQEIKQETKQEQEKENEPKQNSASPTQNNQKTP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
TTPTIGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLAKDKSVKVLEIQNDWAKIEFSNETK
CCCCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHCCCCEEEEEECCCEEEEEECCCCC
GYVFLKLLKKAE
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA