Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527995

Identifier: 188527995

GI number: 188527995

Start: 1234264

End: 1234932

Strand: Reverse

Name: 188527995

Synonym: HPSH_06250

Alternate gene names: NA

Gene position: 1234932-1234264 (Counterclockwise)

Preceding gene: 188527996

Following gene: 188527993

Centisome position: 76.77

GC content: 37.52

Gene sequence:

>669_bases
ATGGCGCTTGAAGTGGTTTTATGGGATTTTGATGGCGTGATTTTTGACAGCATGCATTTAAAATATGAAGGGTTTAAGGC
GTTGTTTCAAAAGCATGGCAACAAGAATCAAGAGAATTTGAAACAATTTGAAGTTTATCATTACCAAAGCGGGGGGATTT
CAAGGAATGAAAAAATCCAATATTTTTATAACGAGATTTTAAAAACCCCTATCGCTCAAGAAGAAGTGGGTGCATTAGCC
CTAGAGTTTGGCGCTATTATAGAACAAAAGCTTTTTGATAGGGGGCATTTGAATAGCGAAGTGATGGCGTTTATTGATAA
GCATTATAAAAATCATGTTTTCCATATCGCTTCAGCGGCCTTGCATAGCGAATTGCAAGTGTTGTGCGAGTTTTTAGGGA
TCATTAAATATTTTAAGAGCGTTGAAGGGAGTCCGCCTAATAAACCTAAAATCATCGCCAATATCATTCAAAAATATGCC
TATAACCCAAGCCGCATGCTAATGATAGGCGATAGCGTCAATGACTATGAAAGCGCTAAGGCTAATAAAGTGGCGTTTTT
GGGTTACAACAGCAAGGTTTTGAAAAATTTGGTGGGTCAAAACGGCTATCAAGGGAAGTATTTGGAGAGCTTTAAAGGGT
TTGATTTGCAAAACTTTATAAAAGAGTGA

Upstream 100 bases:

>100_bases
TCAAGATAGTTCCAACCTTTAAACGGCAAAAATAATCGCTTAAATATCGCTTGAATAAGGTAAAATGAAGCCAAAATAAG
CCTATAAAAAAGGGGAAATC

Downstream 100 bases:

>100_bases
AGCCAACTTTAGCCAAGATTGTCTTTGTGTTGGCTCATATCAATGATGACTTCACAGCGTTCAATCGTGCTTAAGCGGTG
GGCGATAACGATTAGGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Haloacid Dehalogenase Domain Protein Hydrolase; HAD Family Hydrolase; HAD Superfamily Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNKNQENLKQFEVYHYQSGGISRNEKIQYFYNEILKTPIAQEEVGALA
LEFGAIIEQKLFDRGHLNSEVMAFIDKHYKNHVFHIASAALHSELQVLCEFLGIIKYFKSVEGSPPNKPKIIANIIQKYA
YNPSRMLMIGDSVNDYESAKANKVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNFIKE

Sequences:

>Translated_222_residues
MALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNKNQENLKQFEVYHYQSGGISRNEKIQYFYNEILKTPIAQEEVGALA
LEFGAIIEQKLFDRGHLNSEVMAFIDKHYKNHVFHIASAALHSELQVLCEFLGIIKYFKSVEGSPPNKPKIIANIIQKYA
YNPSRMLMIGDSVNDYESAKANKVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNFIKE
>Mature_221_residues
ALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNKNQENLKQFEVYHYQSGGISRNEKIQYFYNEILKTPIAQEEVGALAL
EFGAIIEQKLFDRGHLNSEVMAFIDKHYKNHVFHIASAALHSELQVLCEFLGIIKYFKSVEGSPPNKPKIIANIIQKYAY
NPSRMLMIGDSVNDYESAKANKVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNFIKE

Specific function: Unknown

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25478; Mature: 25346

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNKNQENLKQFEVYHYQSGGISRNEKIQ
CCEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCHHHH
YFYNEILKTPIAQEEVGALALEFGAIIEQKLFDRGHLNSEVMAFIDKHYKNHVFHIASAA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LHSELQVLCEFLGIIKYFKSVEGSPPNKPKIIANIIQKYAYNPSRMLMIGDSVNDYESAK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHCC
ANKVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNFIKE
CCEEEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHCC
>Mature Secondary Structure 
ALEVVLWDFDGVIFDSMHLKYEGFKALFQKHGNKNQENLKQFEVYHYQSGGISRNEKIQ
CEEEEEECCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCHHHH
YFYNEILKTPIAQEEVGALALEFGAIIEQKLFDRGHLNSEVMAFIDKHYKNHVFHIASAA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LHSELQVLCEFLGIIKYFKSVEGSPPNKPKIIANIIQKYAYNPSRMLMIGDSVNDYESAK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHCC
ANKVAFLGYNSKVLKNLVGQNGYQGKYLESFKGFDLQNFIKE
CCEEEEECCCHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA