Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527985

Identifier: 188527985

GI number: 188527985

Start: 1226967

End: 1227158

Strand: Direct

Name: 188527985

Synonym: HPSH_06200

Alternate gene names: NA

Gene position: 1226967-1227158 (Clockwise)

Preceding gene: 188527980

Following gene: 188527994

Centisome position: 76.28

GC content: 32.81

Gene sequence:

>192_bases
TTGACATATTTCAAGCCTTTAATCAAAAATTTTGAGTTATTTAATGCATTAATTCAAGTAAGCATTGCAAAAGGATCTTT
AAACTTTAGAACCATCCATGATAAAAATACCAAAAACCCACCTGCAATACTAACCACTTTAGGCCACACACTCACAAACA
AAATCATGGAGCAAAATCATCTACCACGCTAG

Upstream 100 bases:

>100_bases
TCATAACTATCTCGTTGCAATAATAATAAATTAGGGACTTCTAAATCTGTTGGGGTTTTTGTAAAATCAGCTCTCAAGCG
GTTTTTTAGGGGAATTTTTT

Downstream 100 bases:

>100_bases
AGCAGAGAAAGGCGCAAAGGCCTTTCTGCTTTTAAGTCTTACTTGACTTCAACCTTAGCGCCTACTTCTTCGAGTTTTTT
CTTGATGGTTTCAGCTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MTYFKPLIKNFELFNALIQVSIAKGSLNFRTIHDKNTKNPPAILTTLGHTLTNKIMEQNHLPR

Sequences:

>Translated_63_residues
MTYFKPLIKNFELFNALIQVSIAKGSLNFRTIHDKNTKNPPAILTTLGHTLTNKIMEQNHLPR
>Mature_62_residues
TYFKPLIKNFELFNALIQVSIAKGSLNFRTIHDKNTKNPPAILTTLGHTLTNKIMEQNHLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7235; Mature: 7103

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYFKPLIKNFELFNALIQVSIAKGSLNFRTIHDKNTKNPPAILTTLGHTLTNKIMEQNH
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
LPR
CCC
>Mature Secondary Structure 
TYFKPLIKNFELFNALIQVSIAKGSLNFRTIHDKNTKNPPAILTTLGHTLTNKIMEQNH
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
LPR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA