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The map label for this gene is yajR [H]

Identifier: 188527969

GI number: 188527969

Start: 1201396

End: 1202727

Strand: Direct

Name: yajR [H]

Synonym: HPSH_06120

Alternate gene names: 188527969

Gene position: 1201396-1202727 (Clockwise)

Preceding gene: 188527965

Following gene: 188527970

Centisome position: 74.69

GC content: 40.62

Gene sequence:

>1332_bases
ATGTTTAAGAAAATTTTTCCATTAGCGTTAGTTTCGTCGTTGCGGTTTTTGGGGCTTTTTATTGTTTTGCCTGTCATCAG
TTTGTATGCGGATAGTTTCCATTCAAGCAGTCCCTTACTCGTGGGGTTGGCTGTGGGCGGAGCGTATCTTACGCAAATTG
TTTTTCAAACCCCCATGGGCATTCTTAGCGATAAGATAGGCCGTAAAGTGGTGGTTATGGTATGCTTGTTGTTGTTTTTA
ATTGGCTCGTTAGTGTGCTTTATAGCAAATGATATTGTTTGGCTCGTTATAGGGCGCTTCATTCAAGGCATGGGGGCTTT
AGGGGGGGTTGTTAGCGCGATGGTGGCTGATGAAGTGAAAGAAGAAGAGCGCACCAAAGCCATGGCGATCATGGGAGCGT
TTATTTTCATTAGCTTCACCATAAGCATGGCGATTGGCCCTGGGGTTGTGGCGTTTTTGGGGGGGGCAAAATGGCTCTTT
TTACTCACTGCGATCTTAACTCTATTGAGTTTATTGATGCTTTTAAAAGTCAAAGACGCCCCTAAAATTTCTTACCAGAT
CAAAAACATAAAAGCTTACCAACCCAACTCTAAAGCCTTGTATCTTTTGTATCTAAGCTCTTTTTTTGAAAAAGCGTTCA
TGACGCTTATTTTTGTGCTGATCCCTTTAGCCTTAGTGAATGAATTTCATAAAGATGAAAGCTTTTTGATTTTGGTGTAT
GTGCCTGGAGCCTTATTAGGGGTTTTAAGCATGGGAGTAGCGAGCGTTATGGCTGAAAAATACAATAAGCCTAAAGGGGT
AATGCTTTCTGGTGCGCTGTTGTTTATTGTGAGTTATTTGTGCTTGTTTTTAGCCGACTCTAGCTTTTTAGGAAGATATT
TATGGCTATTCATTCTTGGGGTGGCGTTTTTCTTTATTGGCTTTGCCACCTTAGAGCCTATCATGCAATCTTTAGCGTCC
AAATTCGCCAGAGCGCATGAAAAAGGCAAGGTTTTAGGGCAATTCACTACTTTTGGCTATTTAGGGAGCTTTGTTGGAGG
CGTGAGCGGAGGGTTGAGCTACCATCATCTAGGCGTTTCTAACACAAGCTTAATTGTTGTAGCTTTAGGGCTTATTTGGG
GGCTATCGCTCTTTTTACTCAACAACCCTTCCAAGCAAAAAAATGTCTATTTCCCCCTAGACGCTTATAATGAGGAACAA
TTTGAAACTTTAGAGGATAAAATCATTGAATGGTATGTTAATATTAGCGAAGAAATCATTATTGTGAAATATAATTCCGA
TCACATTAGCGAAGAAGAAATCATTCGCTTAGCGCAAAACTTTAGAAAATAA

Upstream 100 bases:

>100_bases
TTTTCTTAAAAATCCATTAAAATTACATTAAACTTTTATTACAATCTTACTTTCTCAAATTGATGACAAAAGTTGGGCAT
TTTCTTGTAAAATAACCCGC

Downstream 100 bases:

>100_bases
ATAATCAAGGATCAAAAATGGCCTATGAAATTTCTAAAAAAGTCTTACACATTGTGGGTAAGACCAACGCCACTTACAAA
CTCATAGAAGAAGGCGATAA

Product: multidrug-efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MFKKIFPLALVSSLRFLGLFIVLPVISLYADSFHSSSPLLVGLAVGGAYLTQIVFQTPMGILSDKIGRKVVVMVCLLLFL
IGSLVCFIANDIVWLVIGRFIQGMGALGGVVSAMVADEVKEEERTKAMAIMGAFIFISFTISMAIGPGVVAFLGGAKWLF
LLTAILTLLSLLMLLKVKDAPKISYQIKNIKAYQPNSKALYLLYLSSFFEKAFMTLIFVLIPLALVNEFHKDESFLILVY
VPGALLGVLSMGVASVMAEKYNKPKGVMLSGALLFIVSYLCLFLADSSFLGRYLWLFILGVAFFFIGFATLEPIMQSLAS
KFARAHEKGKVLGQFTTFGYLGSFVGGVSGGLSYHHLGVSNTSLIVVALGLIWGLSLFLLNNPSKQKNVYFPLDAYNEEQ
FETLEDKIIEWYVNISEEIIIVKYNSDHISEEEIIRLAQNFRK

Sequences:

>Translated_443_residues
MFKKIFPLALVSSLRFLGLFIVLPVISLYADSFHSSSPLLVGLAVGGAYLTQIVFQTPMGILSDKIGRKVVVMVCLLLFL
IGSLVCFIANDIVWLVIGRFIQGMGALGGVVSAMVADEVKEEERTKAMAIMGAFIFISFTISMAIGPGVVAFLGGAKWLF
LLTAILTLLSLLMLLKVKDAPKISYQIKNIKAYQPNSKALYLLYLSSFFEKAFMTLIFVLIPLALVNEFHKDESFLILVY
VPGALLGVLSMGVASVMAEKYNKPKGVMLSGALLFIVSYLCLFLADSSFLGRYLWLFILGVAFFFIGFATLEPIMQSLAS
KFARAHEKGKVLGQFTTFGYLGSFVGGVSGGLSYHHLGVSNTSLIVVALGLIWGLSLFLLNNPSKQKNVYFPLDAYNEEQ
FETLEDKIIEWYVNISEEIIIVKYNSDHISEEEIIRLAQNFRK
>Mature_443_residues
MFKKIFPLALVSSLRFLGLFIVLPVISLYADSFHSSSPLLVGLAVGGAYLTQIVFQTPMGILSDKIGRKVVVMVCLLLFL
IGSLVCFIANDIVWLVIGRFIQGMGALGGVVSAMVADEVKEEERTKAMAIMGAFIFISFTISMAIGPGVVAFLGGAKWLF
LLTAILTLLSLLMLLKVKDAPKISYQIKNIKAYQPNSKALYLLYLSSFFEKAFMTLIFVLIPLALVNEFHKDESFLILVY
VPGALLGVLSMGVASVMAEKYNKPKGVMLSGALLFIVSYLCLFLADSSFLGRYLWLFILGVAFFFIGFATLEPIMQSLAS
KFARAHEKGKVLGQFTTFGYLGSFVGGVSGGLSYHHLGVSNTSLIVVALGLIWGLSLFLLNNPSKQKNVYFPLDAYNEEQ
FETLEDKIIEWYVNISEEIIIVKYNSDHISEEEIIRLAQNFRK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=358, Percent_Identity=32.9608938547486, Blast_Score=152, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48892; Mature: 48892

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKIFPLALVSSLRFLGLFIVLPVISLYADSFHSSSPLLVGLAVGGAYLTQIVFQTPMG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCHH
ILSDKIGRKVVVMVCLLLFLIGSLVCFIANDIVWLVIGRFIQGMGALGGVVSAMVADEVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEERTKAMAIMGAFIFISFTISMAIGPGVVAFLGGAKWLFLLTAILTLLSLLMLLKVKDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PKISYQIKNIKAYQPNSKALYLLYLSSFFEKAFMTLIFVLIPLALVNEFHKDESFLILVY
CCCEEEEECEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
VPGALLGVLSMGVASVMAEKYNKPKGVMLSGALLFIVSYLCLFLADSSFLGRYLWLFILG
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VAFFFIGFATLEPIMQSLASKFARAHEKGKVLGQFTTFGYLGSFVGGVSGGLSYHHLGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
NTSLIVVALGLIWGLSLFLLNNPSKQKNVYFPLDAYNEEQFETLEDKIIEWYVNISEEII
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEE
IVKYNSDHISEEEIIRLAQNFRK
EEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFKKIFPLALVSSLRFLGLFIVLPVISLYADSFHSSSPLLVGLAVGGAYLTQIVFQTPMG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCHH
ILSDKIGRKVVVMVCLLLFLIGSLVCFIANDIVWLVIGRFIQGMGALGGVVSAMVADEVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEERTKAMAIMGAFIFISFTISMAIGPGVVAFLGGAKWLFLLTAILTLLSLLMLLKVKDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PKISYQIKNIKAYQPNSKALYLLYLSSFFEKAFMTLIFVLIPLALVNEFHKDESFLILVY
CCCEEEEECEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
VPGALLGVLSMGVASVMAEKYNKPKGVMLSGALLFIVSYLCLFLADSSFLGRYLWLFILG
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VAFFFIGFATLEPIMQSLASKFARAHEKGKVLGQFTTFGYLGSFVGGVSGGLSYHHLGVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
NTSLIVVALGLIWGLSLFLLNNPSKQKNVYFPLDAYNEEQFETLEDKIIEWYVNISEEII
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEE
IVKYNSDHISEEEIIRLAQNFRK
EEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]