| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is glnH [H]
Identifier: 188527957
GI number: 188527957
Start: 1190831
End: 1191664
Strand: Direct
Name: glnH [H]
Synonym: HPSH_06060
Alternate gene names: 188527957
Gene position: 1190831-1191664 (Clockwise)
Preceding gene: 188527956
Following gene: 188527958
Centisome position: 74.03
GC content: 36.93
Gene sequence:
>834_bases ATGAAAACAAACGGGCTTTTTAAGGTATGGGGGCTATTTTTAGTTTTAATCGCTTTAGTCTTTAGCGCATGTTCTGATAG CCATAAGGAAAAAAAGGACGCTTTAGAGGTCATTAAACAAAGAGGGGTTTTAAAAGTGGGGGTTTTTAGCGATAAGCCTC CTTTTGGCTCTGTGGATTCTAAAGGGAAATATCAAGGCTATGATGTGATCATTGCTAAACGCATGGCCCTTGATTTATTG GGCGATGAAAATAAGATTGAGTTTATTCCTGTAGAAGCTTCAGCTAGGGTGGAATTTTTAAAAGCCAATAAAGTGGATAT TATCATGGCTAATTTCACGCGCACTAAAGAAAGAGAAAAAGTCGTGGATTTCGCTAAGCCGTATATGAAAGTCGCTTTAG GGGTGATTTCTAAAGATGGGGTCATTAAAAATATAGAAGAATTGAAAGATAAAGAGTTGATTGTGAATAAAGGCACGACA GCGGATTTTTATTTCACTAAAAATTACCCCAATATCAAACTTTTGAAATTTGAGCAAAATACAGAGACTTTTTTAGCCCT TTTAGACAATAAGGCTATCGCTCTAGCCCATGACAACACTTTATTGCTCGCTTGGACAAAACAGCACCCTGAATTTAAAT TAGGCATTACAAGCCTTGGCGATAAGGATGTGATCGCTCCAGCGATTAAAAAAGGCAACCCTAAGCTTTTAGAATGGTTG GATAACGAAATGGATTCTCTCATTTCTAGCGACTTCTTAAAAGAAGCTTATAAGGAAACTTTAGAGCCTGTTTATGGCGA TAAAATCAAACCGGAAGAAATCATTTTTGAATGA
Upstream 100 bases:
>100_bases TCAAAGAGCGCAAAAATTTTTAGAAACTTTTCATTTTTTAGGGAGCTGTTAAATAAAGTTTGCTAAAAAGATGATTTCAA TTTCAAAAAAAGGTGTTTTT
Downstream 100 bases:
>100_bases TTTTTTAGGCTTTGTTTTCTTGATGGAGCGTGTTTTGATCGCTAAATTAGCGGTTTTGTGATCTTTTTGTTTTTAATTTT GAGATATATTTGTTTGATTT
Product: glutamine ABC transporter, periplasmic glutamine-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKTNGLFKVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVIIAKRMALDLL GDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAKPYMKVALGVISKDGVIKNIEELKDKELIVNKGTT ADFYFTKNYPNIKLLKFEQNTETFLALLDNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL DNEMDSLISSDFLKEAYKETLEPVYGDKIKPEEIIFE
Sequences:
>Translated_277_residues MKTNGLFKVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVIIAKRMALDLL GDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAKPYMKVALGVISKDGVIKNIEELKDKELIVNKGTT ADFYFTKNYPNIKLLKFEQNTETFLALLDNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL DNEMDSLISSDFLKEAYKETLEPVYGDKIKPEEIIFE >Mature_277_residues MKTNGLFKVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGKYQGYDVIIAKRMALDLL GDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFAKPYMKVALGVISKDGVIKNIEELKDKELIVNKGTT ADFYFTKNYPNIKLLKFEQNTETFLALLDNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL DNEMDSLISSDFLKEAYKETLEPVYGDKIKPEEIIFE
Specific function: Involved in glutamine-transport system. Interacts with the glutamine-transport system glnPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=208, Percent_Identity=24.0384615384615, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787088, Length=199, Percent_Identity=24.1206030150754, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788228, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787031, Length=205, Percent_Identity=29.2682926829268, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 31280; Mature: 31280
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNGLFKVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDS CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC KGKYQGYDVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREK CCCCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHH VVDFAKPYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADFYFTKNYPNIKLLKFEQN HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEEECC TETFLALLDNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL CHHEEHHHCCCEEEEEECCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHH DNEMDSLISSDFLKEAYKETLEPVYGDKIKPEEIIFE HHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHCCC >Mature Secondary Structure MKTNGLFKVWGLFLVLIALVFSACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDS CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC KGKYQGYDVIIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREK CCCCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHH VVDFAKPYMKVALGVISKDGVIKNIEELKDKELIVNKGTTADFYFTKNYPNIKLLKFEQN HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEEECC TETFLALLDNKAIALAHDNTLLLAWTKQHPEFKLGITSLGDKDVIAPAIKKGNPKLLEWL CHHEEHHHCCCEEEEEECCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHH DNEMDSLISSDFLKEAYKETLEPVYGDKIKPEEIIFE HHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1856180 [H]